Lacticaseibacillus zeae: KG087_05205
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Entry
KG087_05205 CDS
T07978
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lze
Lacticaseibacillus zeae
Pathway
lze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KG087_05205 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lze03019
]
KG087_05205 (recQ)
03400 DNA repair and recombination proteins [BR:
lze03400
]
KG087_05205 (recQ)
Enzymes [BR:
lze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KG087_05205 (recQ)
Messenger RNA biogenesis [BR:
lze03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KG087_05205 (recQ)
DNA repair and recombination proteins [BR:
lze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KG087_05205 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HHH
Motif
Other DBs
NCBI-ProteinID:
QVI32984
LinkDB
All DBs
Position
1048043..1049824
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AA seq
593 aa
AA seq
DB search
MVVTQPTTILKEKFGYDHFRTGQKQAIDRVMAGESTLVVMPTGGGKSLCYQVPAMLLPGL
TLVVSPLIALMKDQVDALNDNDIPATFINSTLDYQTINERLNQAKSGQIKLLYVAPERFD
NDWFVQQLAATHVALFAIDEAHCISQWGHDFRPSYLNLAQVAAQLPAHPPVIALTATATP
RVSQDICQRLMIPDDGVINTGFERDNLSFKVVRDQDEDRYLLDYLKLNADQSGIIYASTR
KEVDRLYTFLEHKKLPVAKYHAGMTEKQRATNQEDFLFDRKPIMIATNAFGMGIDKSNVR
FVIHAQIPKDLESYYQEAGRAGRDGLPSEAILLFKPQDLQVQRFFIDQSEGDEAHKERQY
DKLKTMERYANTDQCLQQFILDYFGQTGTKPCGRCSNCLDDRESVDVTIDAQKVLSCVVR
LHERFGKGVVAQVLAGAHNQRVLSFHLDQLSTYGLMKNRRQRDITTFIDFLTAGGYLETR
GGQYPTLGLTAKGAEVLRGQATVFQKTAQKAKQTLEVDDTVFQELRSTRRQLAEQQHLPP
YMIFSDKTLKAIGSAMPQTMDEFLAVKGVGQAKLDKYGQIFLDVLKAIQPEKA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcacgcaaccaacgacgattttaaaagaaaaattcggttacgatcattttcga
accggccaaaaacaggcaattgatcgcgtgatggcgggagaaagcaccttagtcgtgatg
ccgaccggtggtggtaagtcgttgtgctatcaggtgccggctatgttactgccaggattg
acattggtggtgtcgcctttgattgccttgatgaaggatcaggttgacgctttaaatgac
aatgatattccagcgacatttatcaacagcacccttgattatcagacaattaatgagcga
ctgaatcaggcaaaatcggggcagatcaaattgttgtatgtggctccggaacgatttgac
aacgattggtttgtgcagcaacttgccgcgacgcatgtggcgctttttgccattgatgaa
gcccattgtatttcgcagtggggccatgatttccggccgagttatctgaatcttgcccag
gttgctgcccagttgccggcacatccgcctgtaattgccttgactgcaaccgctacaccg
cgggtcagtcaggatatttgtcaacgtctgatgattccggatgatggggtcattaatacc
ggatttgaacgcgataaccttagctttaaagtggttcgtgatcaggacgaagatcgttat
ttattggactatcttaaacttaatgccgaccaatccggcattatttacgcgagcactcgc
aaagaggtggatcgcctttatacatttttggaacataaaaaattaccggtggcaaagtat
cacgccggtatgactgaaaagcagcgggcaaccaatcaagaagattttctgtttgatcgt
aagccgattatgattgcgacgaacgcatttggaatgggtattgataaaagtaacgttcgt
ttcgtgattcatgcacaaattcccaaagatcttgagtcttattatcaagaagctgggcgg
gccggacgagatggcttgccaagtgaagccattttgttgttcaaaccgcaagatttacag
gtgcaacggttcttcattgaccaatccgaaggtgacgaggcccacaaagagcggcaatat
gacaagctaaaaacaatggaacgttatgccaataccgatcagtgtctacaacagttcatt
ttggattattttgggcaaacaggaaccaagccatgcggacgctgctccaattgtcttgat
gatcgcgaatcggttgacgtgaccattgatgcacagaaggtgttgtcatgtgtcgtacgg
ttgcacgaacgattcggcaaaggcgtcgttgcccaagtgctcgcaggtgcgcacaatcag
cgcgtcttgtcgtttcacctggatcagctgtctacatacggcttgatgaaaaatcggcga
cagcgtgatatcacgacatttatcgactttttgacagctggcgggtatctcgaaactcgc
ggcggccagtatccgacacttgggcttaccgccaaaggagccgaagttttacgcggccag
gcaactgttttccagaaaaccgcgcagaaagcgaagcaaacactggaagttgacgacacg
gtcttccaggaattgcgcagtactcggcgccagttggcagagcaacagcacttgccgcct
tatatgatcttctcggataaaacgctaaaggcaatcggcagcgcaatgccgcaaacgatg
gatgaatttttggcggtcaaaggcgtcggccaagctaaactcgataaatacgggcaaatc
tttttggacgttttaaaagcgatccaaccggaaaaagcatga
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