Lacticaseibacillus zeae: KG087_06255
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Entry
KG087_06255 CDS
T07978
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lze
Lacticaseibacillus zeae
Pathway
lze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KG087_06255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lze03400
]
KG087_06255
Enzymes [BR:
lze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KG087_06255
DNA repair and recombination proteins [BR:
lze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KG087_06255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
HHH_5
UvrD_C
IMS_HHH
UvrD-helicase
HHH
DUF3653
AAA_16
HTH_IclR
AAA_18
AAA_29
RecR_HhH
AAA
AAA_28
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QVI33458
LinkDB
All DBs
Position
1296809..1299277
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AA seq
822 aa
AA seq
DB search
MDRHEDSVTGRVKSIFFQNPTNFFKILLIDITATTITWTEPDIVVTGTFGDIKEDETYTF
TGHVINHPKYGQEFQADNYHVDQPTNKTGLINYLSSDKFPGIGPKTAEKIIDKLGVDAIN
QILDDPASLEGLGITAAKRKMLVDNLKTNQGMERVIIGLNDYGFTSNMAGRIYQQYRNDA
LEVIKQNPYQLINDIAGIGFTRADQIAAKLNIAPDSQLRLGGAVMDTLQRLTDGEGDTFV
ELRTLVTQTLDLLERARNIAVKPDDVGQAIVTLAKDNELVAEGKRISPKRLYDSEWQIAR
QLKGLAEAGAKAEEPELPDIEKTLAEVQADTGIAYDDVQKKAIVTALRSPIFLLTGGPGT
GKTTVTDGIVRTYARLHDLSLDANQYNSDDPFPIMLAAPTGRAAKRISETTQLPASTIHR
LLGLGVDTQDFAPNDLPDGLLIIDEMSMVDTYLFRTLLTALHPGMQIVLVGDKDQLPSVG
PGQVFADLLRSGALPQAALTHIHRQDADSSIIPLAHAVNAGKLPDDFTQPQVDRSFLACT
PSQVPEVVGQVVKRAAVKQFSIADIQVLAPMYRGTAGIDRLNPMLQNILNPKRSARTKTV
HFGDTEYRIGDKILQLVNDPNQNVFNGEIGQIVGITLAKEAPSKTDELTIDFDGNEITYK
RSDFSKITLAYATSIHKAQGSEFPMVILPLTLQSRRMLRRNLLYTAITRAKSFLILVGEL
AAFETAVGEVAVNRHTGLVQRLQQVFDIEGSQTTVEEAAEPQPALPQQSAQIDTNGSDSD
NEVRPAKTAPHQLTPALAASQKIDPMIGMDGITPQMFMTKEN
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggacaggcatgaggatagtgtcaccggccgggtcaaaagcattttctttcagaatcca
acgaatttttttaaaattctcctgattgatattacggctacgaccatcacctggacagaa
ccggatattgtcgtgaccggaacatttggtgatatcaaggaagacgaaacttacaccttt
accggtcatgtgattaaccatcccaaatatggccaagagtttcaggcagataattatcac
gttgatcagccaaccaataaaaccggtttgatcaattacctcagttcggataagtttccg
ggcatcgggcctaaaactgccgagaagatcattgataagctcggagtggatgcgattaat
cagattctcgacgacccggcatcgcttgagggacttggcatcaccgctgcaaagcgaaaa
atgctggttgacaatctcaagacgaatcaaggcatggaacgcgtcatcatcggactgaat
gattacggcttcaccagtaacatggctgggcggatttatcagcagtaccgaaatgatgcg
ctagaagtgattaagcaaaacccgtatcaactcatcaatgatattgccggcatcgggttt
acccgcgccgatcaaattgctgccaaattgaatatcgcaccggattcgcaattgcgtctc
ggcggtgccgtcatggacacgctacaacgcctgaccgatggtgaaggggacacttttgtc
gaactgcgcacactggttacccagacacttgatttgttagagcgggcacggaatattgcc
gttaagccggatgacgttggtcaggccattgtgactctggctaaagataatgagctggtc
gctgaaggtaagcggatttctcctaaacggctctatgattcagagtggcagattgcccgt
cagttgaagggattagccgaagcaggcgcgaaggctgaagaacctgagctgccagatatt
gaaaaaacgttagcggaagtgcaggcagacaccggcattgcctacgatgatgtccaaaaa
aaagcaattgtcacggctttacgctcgccgatttttctgttgactggcggccccggtacc
ggaaaaacgaccgtgacagatggtatcgttcgcacttatgcgcgactacatgacctctcg
ttagatgccaatcagtataactcggatgatccatttccaatcatgttggcagcaccgact
ggccgcgcagctaagcgaatcagtgagacgacgcaattaccggccagtaccattcatcga
ttattgggactgggcgtagatacgcaggattttgcgcctaatgatctgccggatgggctg
ttgattattgatgaaatgtcgatggtcgatacgtatttatttcggacgctgttgaccgcg
cttcatcccggcatgcagattgttttggtcggggataaggatcagttgcctagtgtgggt
ccgggtcaggttttcgcggatcttttacgcagcggcgcattgccacaagcagctttaacc
catattcatcgccaggacgccgatagttcgattattccgttagctcatgcggtgaatgcc
ggtaaacttcctgacgatttcacgcaaccgcaagtggatcgcagttttttggcatgcacg
cctagccaagtgccggaagtcgtgggtcaggtcgtgaagcgggctgctgttaagcagttt
tcgatcgccgacattcaggttttggcgccaatgtatcgcggaacggcgggaattgatcgc
ctcaatccaatgctgcagaatattttaaatcctaaacgtagcgcgcggaccaaaaccgtt
cattttggcgacaccgagtatcgaatcggtgataaaatcctgcaactggtcaatgatcct
aatcagaatgtcttcaatggcgaaatcggccagattgtcgggattacgttagcaaaggaa
gcacctagcaaaaccgatgagctgacgattgattttgacggcaatgagatcacctataag
cgtagcgattttagcaaaatcacgcttgcctatgcgacatcgatccacaaagctcaaggg
agcgaatttccgatggtgattttgccgttaaccttgcaaagtcgccgaatgttgcggcga
aacttactctataccgccattacccgggcaaagtcatttctgattctggttggcgaacta
gcggcttttgaaacggcggttggtgaagtggccgtcaatcggcacacggggttggttcag
cggttgcagcaggtgtttgacatcgaaggatcacaaacgactgttgaagaagctgcggag
ccacaaccagctttgccgcaacaatccgcacaaattgacacaaatggttccgactcggat
aatgaagttaggcctgccaaaacggcgcctcaccagttaacgccggcactggcagcctca
cagaaaattgatccgatgattggaatggatggtataaccccgcaaatgtttatgacgaag
gagaattaa
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