Companilactobacillus zhachilii: D1B17_02000
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Entry
D1B17_02000 CDS
T06807
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lzh
Companilactobacillus zhachilii
Pathway
lzh03420
Nucleotide excision repair
lzh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lzh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D1B17_02000
03430 Mismatch repair
D1B17_02000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lzh03400
]
D1B17_02000
Enzymes [BR:
lzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1B17_02000
DNA repair and recombination proteins [BR:
lzh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1B17_02000
MMR (mismatch excision repair)
Other MMR factors
D1B17_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
SLFN-g3_helicase
AAA_19
UvrD-helicase
UvrD_C_2
Viral_helicase1
AAA_30
PhoH
DEAD
APP1_cat
NACHT
AAA_16
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AYE37498
UniProt:
A0A386PQL4
LinkDB
All DBs
Position
2278345..2280618
Genome browser
AA seq
757 aa
AA seq
DB search
MSINQSKQEEQARVNVVADKIDKKIERVDQSIAQAHQETHRIERNYGENTKVNTTEVDDQ
METNASVQQQKQLVALAVENENILNSNKLKLENLQGSPYFGRIDIVEDGEEDTLYIGTST
LQDDDGEFLIYDWRAPISGIYYNGMLGKVHYQTPNGPTTVDLKKKRQFQIINNKIKTMFD
TNETVGDEILQSVLSEYSDEYLKNIVATIQHEQNTIIRDTHSDVLLVQGVAGSGKTSAIL
QRVAYLLYHSRSTMNADNIVLFSPNKLFSNYISEVLPSLGERNMRQVTLNEFISLRLTGV
QVETLFERYEKDERNLPETTIKIRLFKESGEFLDQLSQLEEEHPDHILHFEDVIFDGKPF
FTKEEISEIYDHVNHAYHIPDRFLKTKNALIKRLQKRIHDDRNEDWVQAEIDNLSDEDFQ
QIITDHNIEESTNQREIIAEEFLRDRYAPIYNALVNNYFFNPYKEYLFLLGKMKQELVSD
SVWQTMVEAIDDNIEAHKLNLSDSVAVLFLRDLVTDSGINHAIQHIFIDEVQDYTMAQLK
YIAHAFPNAKMTLLGDRAQDVLTSSYRKKDLVTEVNELFNKKKVTTITLNQSYRSTAEIT
NFATKLLPNGSEIKAFSRQGEEPVIKVFDDNDYYQGLKDTARELNKKYDTVAILTRNQAQ
AEQIYAHYGDESLVTLVDANFRSIPKGILVLPIYLAKGLEFDAVIAHDVSAKNYPDERSI
DVLYTICTRAMHNLTLCVDTEVSPLLSHESADLISEQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattaatcaatctaaacaagaagaacaagctcgcgtcaatgtcgttgctgacaag
attgacaaaaaaattgaacgcgtcgatcaaagtatcgctcaagcccaccaagaaacacat
cggattgaacgtaactatggtgaaaacactaaggtcaatacaactgaagtcgatgaccaa
atggaaactaacgcctctgttcaacaacagaaacaattggttgctttggcagtcgaaaat
gaaaatattttaaactccaacaaattaaaactcgaaaacctccaaggctcaccttacttt
ggccgcattgatatcgttgaagatggtgaagaagataccctttatattggaacttcaaca
ctgcaagacgatgatggagaatttctcatttatgactggcgtgcccctatttctgggatt
tactacaacgggatgcttggtaaagttcactaccaaacaccaaatggtcccacaactgtg
gatcttaaaaagaaacgtcaatttcaaattatcaacaataaaatcaagaccatgtttgat
accaatgaaaccgttggtgatgagattctccaatcggttctaagcgaatatagtgatgaa
tatttgaagaatattgttgcaacgattcaacatgagcaaaacactattatccgtgatact
cattctgacgtcctcttagtccaaggtgtcgctggttctggtaaaacctctgccatctta
caacgggtagcttacttgctttatcacagccgttcaacgatgaacgctgacaacattgtc
ctcttttcacctaacaaacttttcagtaattatatttcagaagttttaccaagtttgggt
gaaaggaacatgcgccaggttactttgaatgaattcatttctttacgtctaactggtgtt
caagtcgaaacactgtttgaacgttatgaaaaagatgaacgcaacttacccgaaacaacc
attaagattcgcctcttcaaagaaagtggtgaatttctcgaccagttatcacaattggaa
gaagaacatcccgaccacattttacattttgaagatgtcatttttgatggcaaacctttc
ttcactaaagaagaaatttctgagatttatgatcacgtcaatcatgcctatcacattccc
gatcgtttcttaaaaactaaaaatgctcttatcaaacgacttcagaaacgtatccatgat
gaccgcaacgaagattgggttcaagctgaaattgataatctatcggatgaagacttccaa
caaatcattaccgatcacaatatcgaagaatcaaccaaccaacgggaaatcattgctgaa
gaattcctaagagaccgctatgctccaatttacaatgccctagtcaataactatttcttt
aacccctacaaagaataccttttcctattaggcaaaatgaaacaagaacttgtttctgat
agtgtctggcaaacaatggttgaagccatcgacgacaatatcgaagctcacaagctcaat
ctgagcgattccgttgcagtgcttttcttacgtgatttggtaaccgatagtggtattaat
cacgctatccaacatatcttcattgatgaagtccaagattacacaatggctcaattgaaa
tacatcgcccacgcctttcctaatgccaaaatgacattgctaggtgaccgtgctcaagat
gttttgactagttcttatcgtaaaaaagaccttgttaccgaagttaatgaacttttcaat
aagaaaaaagtcactaccattacactcaatcagagttatcgttcaactgctgaaatcact
aactttgcgacaaaactgttaccaaatggcagtgaaatcaaagcattctctcgtcaaggt
gaagagccagtaatcaaagtttttgatgataacgactattatcaaggattaaaagatacc
gcacgtgaattaaacaaaaagtacgataccgtggctattttgacgcgaaaccaggcccaa
gcggaacaaatttatgctcattatggggatgaatcattagtgaccctagtcgatgccaat
ttccgttctattcccaaaggaatcctagtcttaccaatttatttagccaaaggcttggaa
tttgacgctgttattgcccacgatgtttcagctaagaactaccctgacgaacgtagcatt
gatgttttatacacaatttgtacacgggctatgcataatttaacattgtgcgttgataca
gaagtttcacctttattgagtcatgaatcagctgacttaatttcagaacaataa
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