Companilactobacillus zhachilii: D1B17_02170
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Entry
D1B17_02170 CDS
T06807
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lzh
Companilactobacillus zhachilii
Pathway
lzh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lzh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1B17_02170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lzh03019
]
D1B17_02170
03009 Ribosome biogenesis [BR:
lzh03009
]
D1B17_02170
Enzymes [BR:
lzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D1B17_02170
Messenger RNA biogenesis [BR:
lzh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D1B17_02170
Ribosome biogenesis [BR:
lzh03009
]
Prokaryotic type
rRNA helicases
D1B17_02170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Helicase_RecD
CMS1
CobA_CobO_BtuR
Motif
Other DBs
NCBI-ProteinID:
AYE37530
UniProt:
A0A386PT21
LinkDB
All DBs
Position
complement(2235123..2236655)
Genome browser
AA seq
510 aa
AA seq
DB search
MKFKELDLDPRLLSAVDEAGFEETTPIQAQTIPLVMSGDDVIGQAQTGTGKTAAFGLPLL
NAVDTQSSDIQALIISPTRELAIQTQEELYRLGSKKKVKVQSVYGGSDIRRQIRALKSHP
QIIVGTPGRMLDHINRHTLKLHNVKTVVLDEADEMLDMGFVEDIESILSNVPNKHQTLLF
SATMPKPIMKIADKFMTEPKVVKIKSKELTADKIEQYFVKAKEFEKFDLMTRIFDVQAPE
LALIFGRTKRRVDELTRGLQARGYNAEGIHGDLSQDKRTSVLRKFKAGKLDFLVATDVAA
RGLDISGVSHVYNYDIPQDPDSYVHRIGRTGRAGHSGVSVTFVTPNEMGYLRTIENLTKK
RMEPLAPPTDKEVLKGQLEAVKQDIKDTLEHDKHLDRFDSAVQELLSEYSAEDIARIFLS
ESIKDAESVPVKIAPERPLPSRKVSHSRSGHGRRRNGRGGDHRGGGNRRRNDRRDGGRNH
DDKGGKRREHDNRRNGRSKKSFKIRTNLEK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatttaaagaattagatttagatcccagattattgagtgccgtagacgaagccggt
tttgaagaaactacacctattcaagctcaaactattccactagttatgagtggcgatgac
gtcatcggacaagctcaaactggtacaggtaagacggcagcctttggcttaccattgcta
aatgccgttgatactcaatcaagtgatattcaagcattgattatctcaccaactagagaa
ttagctatccaaactcaagaagagttatatcgtttaggtagtaaaaagaaggttaaagtt
caaagtgtttatggtggttctgacattagacgtcaaatccgtgctttgaagagtcatcct
caaattattgtcggtacaccaggtcgtatgcttgaccatatcaaccgtcacactttgaag
ttgcacaacgttaagaccgttgttcttgatgaagccgacgaaatgttggacatgggattc
gttgaagatattgaaagtatcttgtcaaacgttcctaacaagcaccaaacattgttgttc
tctgcaacaatgcctaagccaatcatgaagattgctgacaagttcatgactgaaccaaaa
gttgttaagattaagtcaaaggaattgactgctgataagatcgaacaatattttgttaaa
gccaaggaatttgaaaaatttgatttaatgacacgtattttcgatgtacaagctccagag
cttgctttgattttcggtcgtacaaagcgccgtgttgatgaattaacacgtggtttacaa
gctcgtggttacaatgctgaaggaattcatggtgacttatcacaagataagagaactagc
gttttacgtaagttcaaagccggtaagttagacttcctagttgcaactgatgttgctgct
cgtggtttggatatttctggtgtatcacatgtttataactacgatattccacaagatcca
gatagttatgttcaccgtattggccgtacaggtcgtgccggacactctggtgtgtcagta
actttcgttacaccaaacgaaatgggttacttacgtactattgaaaacctaactaagaaa
cgtatggaacctttggctccaccaactgataaagaagttcttaaaggtcaacttgaagct
gttaagcaagatatcaaggatactttggaacatgacaagcacttggatcgtttcgattca
gccgttcaagaattactttcagaatactcagctgaagatattgcccgtattttcttgagt
gaatcaattaaggatgcagaatcagttcctgttaagattgctcctgaaagaccacttcca
tcaagaaaagttagccatagccgttcaggtcatggtcgtcgtagaaatggtcgtggtggt
gatcaccgtggcggtggaaacagacgtcgcaatgatcgtcgtgatggtggacgtaaccat
gatgataaaggtggcaaacgccgcgaacatgacaacagacgtaatggtcgtagcaaaaag
tcatttaagatcagaacaaatcttgaaaaataa
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