Companilactobacillus zhachilii: D1B17_03185
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Entry
D1B17_03185 CDS
T06807
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lzh
Companilactobacillus zhachilii
Brite
KEGG Orthology (KO) [BR:
lzh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lzh03019
]
D1B17_03185
03009 Ribosome biogenesis [BR:
lzh03009
]
D1B17_03185
Enzymes [BR:
lzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D1B17_03185
Messenger RNA biogenesis [BR:
lzh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D1B17_03185
Ribosome biogenesis [BR:
lzh03009
]
Prokaryotic type
rRNA helicases
D1B17_03185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
PhoH
DUF4756
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AYE37715
UniProt:
A0A386PS07
LinkDB
All DBs
Position
complement(2024499..2025845)
Genome browser
AA seq
448 aa
AA seq
DB search
MTKFSQYNFNDSINKSLKEIHFDEPTPVQEAVISLVNKKKDIIVQSETGSGKTHAFLLPS
MNALTNKQEVQLLIATPSRELAYQIYEDTQAILKNYPEEYNAFIFVGGSDRDRQKRKLEA
HQPQIAIGTPGRLWDLIRENDLHIENVERFVVDEADMTLDMGFLDDVDHITDKLPENREM
MVFSATIPQKLEPFLKKYMTGPQRVEIKNSSIIPKNVDNWLMSSHGRDKKQLIYQLITLG
EPYLVLIFANTKKSVDEIYNYLRSQGLKVARIHGGLTPRERKRAMKQVENMEYQYVVATD
LAARGIDINGVSHVINAEIPDDLDFFIHRVGRTGRNKMSGTAITIYEPGEEHKVDEIEHM
GIKFEPKDIKHGEIVDAVERDRRVHRRATQEKLDTKLVGYVKKQKTKKKPGYKKKIKQAI
NEEHRQQRKIQIRQNRRQEREARKNKNN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgactaaattttcacaatacaatttcaatgattcaattaataaatcattaaaagaaata
catttcgatgaaccaacaccagtacaagaggcagtaatttccttagtaaataagaagaag
gatattattgttcaatcagaaacaggttctggtaaaacacatgctttcttgttgccatca
atgaatgctttgacaaataagcaagaagtacagttgttgattgcgacaccaagtcgtgag
ttggcttatcaaatttatgaagatacccaagcaattttgaagaactatccggaagaatat
aatgcctttattttcgtcggtggttctgatcgtgatcgtcaaaagagaaaacttgaagct
caccaaccacaaattgctatcggaacaccaggtcgtttatgggatttgattcgtgagaat
gacctacatatcgaaaatgttgaacgtttcgttgtagatgaggctgatatgacattggac
atgggctttttggatgatgttgatcacattactgataagttgccagaaaaccgtgaaatg
atggttttctcagccacaatcccacaaaaactagaaccattcttgaagaaatacatgact
ggtccacaacgtgtggaaattaagaatagtagtattattcctaagaacgttgataattgg
ttaatgtcaagtcacggccgtgataagaaacaattgatttaccaattgattactttaggt
gaaccatacttggtattaattttcgccaataccaagaagagtgtcgatgaaatttataac
tatcttcggagtcaaggtttgaaagtcgcacgtattcatggtggactaacaccccgtgag
agaaaacgtgccatgaaacaagttgaaaatatggaatatcaatacgtagtagcaaccgat
ttagctgcacgtggaattgatattaacggagtttctcatgtaatcaacgctgaaatccct
gatgatttggacttcttcattcatcgtgtaggtagaactggtcgtaataagatgtcaggt
acagccattacaatttatgaacctggtgaagaacacaaggttgatgaaattgaacacatg
ggaatcaagtttgagccaaaagatatcaaacatggtgaaatcgttgatgccgtggaacgt
gatcgtcgagtacatagacgtgccacacaagagaaacttgatactaagctagttggttat
gttaaaaaacaaaagaccaagaagaagcctggttacaagaagaagatcaagcaagcaatt
aatgaagagcatcgtcaacaaagaaagattcaaattagacaaaatagacgacaagaacga
gaagctagaaaaaacaagaataattag
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