Companilactobacillus zhachilii: D1B17_05900
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Entry
D1B17_05900 CDS
T06807
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lzh
Companilactobacillus zhachilii
Pathway
lzh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lzh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1B17_05900 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lzh03019
]
D1B17_05900 (recQ)
03400 DNA repair and recombination proteins [BR:
lzh03400
]
D1B17_05900 (recQ)
Enzymes [BR:
lzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1B17_05900 (recQ)
Messenger RNA biogenesis [BR:
lzh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D1B17_05900 (recQ)
DNA repair and recombination proteins [BR:
lzh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D1B17_05900 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AYE38189
UniProt:
A0A386PTL7
LinkDB
All DBs
Position
complement(1472318..1474132)
Genome browser
AA seq
604 aa
AA seq
DB search
MKLETILKEEFGYDTFRPGQKELIEKVLDGKKAMGIMPTGGGKSICYQLPATVLPGLTLV
VSPLISLMKDQVDSLNEVGIPATFLNSTVEWHDREERMRYIESGAVKLLFVAPEKIVDDE
FYSWLSALDISLIAIDEAHVLSSWGHDFRNSYLKMVEPLQQLPGDIAWLALTATATEQVQ
DDLAHILDIPDENIVKTGFDRDNLALKIERGVDKPQYILNYVKAHLDESGIIYAGRREDV
DNIYDFLKENDVKVGRYHAGLSDKERHQQQEDFLFDRINVIVATNAFGMGINKTNVRYVL
HFTIPGTIESYYQEVGRAGRDGLPAEAILLYTPADLRLHQFFIDKSLGDDQYKLSLKNKL
FEMSRYAETETCLMKFILDYFGEKDTDVCGRCSNCLDDREVVDVTSDAQKVLSCVVRMGQ
RYGKKITTRVLVGKEDVANDWRHFEKLTTFGIFKDKTLKETSRLIEFLSANGFLGSSGGE
YPTLILSKKGADVLKGKMNVAKRRDLNRVAPSKSMVADGSFDVNLFEKLRSLRLEFARKQ
ALPPFMIFSDKTLKDMCVRIPTDSQEFLAVSGVGKMKLEQYGESFLAAIKDYQASQKSSD
EIVS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattagagaccatcttaaaagaagaatttggttatgatacttttagacctggtcaa
aaagaattgatcgagaaggttttagatggcaaaaaagccatgggaattatgccaactggt
ggtggtaagtcaatttgttatcaattaccagcgacagtgcttccaggtctaacgttggtc
gtttcaccattgatatcattgatgaaggatcaagtcgatagtttaaatgaagttgggatt
ccagcaacatttttgaatagtacggtcgagtggcatgatcgagaagaacgtatgcgttat
atcgagagtggagctgttaaactgttgtttgttgcgccagagaagattgttgacgacgaa
ttttatagttggttgtctgctttagatatatcactgattgcaattgacgaagcacatgtt
ttgtcttcttggggccatgactttcgtaatagttatctcaaaatggttgaacctttacag
caattacccggtgatatcgcttggctagctttaacagcaaccgctactgagcaagtgcag
gatgacttggctcacattttagatattcctgacgaaaatattgtcaaaactggttttgat
cgcgataatctggcacttaaaattgagcgtggggtcgataagccgcaatacatattgaac
tatgtcaaagctcatcttgacgaatcagggattatttatgcaggtcgtagagaagatgtt
gataatatttatgattttctcaaggaaaacgacgtcaaagtaggacgttatcatgccggt
ttaagtgataaagagcgtcatcagcagcaagaagacttcttgtttgaccgaattaacgtg
attgttgcgactaatgctttcggtatggggattaataagactaatgttcgctatgtgcta
cattttacgattcctgggacaatagaaagttattatcaagaagtagggcgtgcaggacgt
gatggattgccagcggaggctatcttgctttatacgccggccgacttaagactacatcag
ttcttcatcgataagtcgctgggggatgaccagtataaacttagtttaaagaataaactg
tttgaaatgagtcgctatgccgaaactgaaacttgtttgatgaagtttatcctagattat
tttggggagaaggatactgacgtttgtggtcggtgttccaattgcttggatgatcgagaa
gtagtcgatgtgacgtcagatgctcaaaaggttttaagttgtgtcgtacgtatgggacaa
cgctatggtaagaagatcacaactcgtgttttagttggtaaagaagacgttgctaacgat
tggcggcattttgagaaattaacaacttttggtattttcaaggataaaactttgaaggaa
actagccgtttgatcgaatttttatccgccaatggatttcttggtagtagtggcggtgaa
tatccaactttgattttgtcgaagaagggtgctgacgttttgaaaggcaaaatgaatgtc
gctaagagacgtgatcttaatcgtgttgcacctagtaagtcaatggttgccgatggtagc
tttgatgttaatttgtttgagaaattacgcagtttgcggcttgaatttgctcgtaagcaa
gctctaccaccatttatgatcttttcagacaagactttgaaagatatgtgtgtgcgtatt
ccgactgatagtcaagaattcttggccgttagtggagtaggtaagatgaagctcgagcag
tatggtgagagtttccttgcagcgattaaggattaccaagcaagtcagaagagtagtgat
gaaatagtcagttaa
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