Companilactobacillus zhachilii: D1B17_07240
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Entry
D1B17_07240 CDS
T06807
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lzh
Companilactobacillus zhachilii
Pathway
lzh03410
Base excision repair
lzh03430
Mismatch repair
lzh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lzh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D1B17_07240 (recJ)
03430 Mismatch repair
D1B17_07240 (recJ)
03440 Homologous recombination
D1B17_07240 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lzh03400
]
D1B17_07240 (recJ)
DNA repair and recombination proteins [BR:
lzh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
D1B17_07240 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D1B17_07240 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D1B17_07240 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
DUF2399
Motif
Other DBs
NCBI-ProteinID:
AYE38442
UniProt:
A0A386PSK2
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All DBs
Position
1200962..1203271
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AA seq
769 aa
AA seq
DB search
MTLINWEKRKNPTKEEITKFATDRNLDSLVAELLLERDITDPLKIQTFLHSDATELQDPF
GLHDMDKALDLIDQAVESGAKIAIYGDYDADGVTSTSIMKLTLQKLGNKPIFYIPDRFKD
GYGPNLDRYKFLADQGIDLLITVDNGVSGKEQIKYMKDRGIKVIVTDHHDLPEELPEADA
IVHPTIPGSEYVCPYLSGAGVAFKIADALLGEEAMDLIDLAAIGTVADSVALKGENRVIV
TEGLKQMKQNHHVGLSALLKKCKVKLADINEEDIGFKIAPRINALGRLENASSGVELLTT
GDESFAKEIVDETEDINSKRQELVQTAFDDAQSQVAAQKDNGVLVLKGNGWHQGVLGIVA
SRVMDQENKPVLATQFDENSGVMKGSGRSPEGFNLFVALNKHKDLFTAFGGHAQACGFSI
EEEQLDKLTELLQTEPAEQEFDPQAPVVKNYDLNLTIADLNLDLIKKINQLAPFGMGNPK
PVIKLKNVSLTQSKAIGKDGSHLKTMVADSNRQVAAIGFGMFAKEQSTDTDICDVYGEIG
INEWAGRKNLQLMLDDFQVSPEAQTIADLKEVYLDYRNKRLSTAILNHFDSIVFFNEVYY
EAAKRSDVKAKLIRYDEECDGKNILIYDRPHNIELFKNFIKENKTQHTALFFHTDLTARY
LKPDMAKMKTLLKYLYSHQNITADGMDLVAQYLNLQKTDVDFYLKVFFELNFVKIVNGFV
EKADASQQRELIESPTYLKRLQRNDVEKILIESNFDDLLSWMSDYDCHC
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ttgacattaataaattgggaaaagcgtaagaatcccacaaaagaagaaataactaaattt
gcgaccgatagaaatcttgacagtttagtagctgaattattattggaacgtgatattacc
gatccattaaaaattcaaacctttttgcatagtgatgcgacggaactacaagatcctttt
ggtttgcatgatatggacaaagccctagatttgattgaccaagcggttgaatcaggtgct
aaaattgcgatttatggtgattatgatgctgatggagtgacaagtacttcgattatgaag
ttaacgttacaaaaattaggcaataagcccattttttacattccggaccgttttaaagat
ggttatggccctaatttagaccgttataaatttttggctgaccaaggaatcgatttgtta
attaccgttgataatggcgtcagtggtaaggaacaaattaaatatatgaaagatcgtggt
atcaaagttatcgtaacagatcaccatgatttgccagaggaattaccagaagcggatgca
atcgtacatccaactattcccggttcagaatatgtttgtccttatttatcaggtgctggg
gtagcatttaagattgctgatgctttattaggcgaagaagccatggatctgattgattta
gctgccattgggactgtagccgattcagtagctttaaaaggtgaaaatcgggttattgtc
actgaaggacttaagcagatgaagcagaaccatcatgttggtttatcggcattgcttaag
aaatgtaaagttaaattggctgatattaatgaagaagatataggttttaaaattgctcca
cgaatcaatgccctaggacgtttggaaaatgcttcctcaggggttgaattgttgacgacc
ggtgatgaatcctttgctaaagaaattgttgacgagactgaagatatcaattctaagcgt
caagaattagttcagacggcctttgatgatgcccaaagtcaagtagctgcccaaaaagat
aatggtgtgttagttttgaagggcaacggttggcatcaaggtgtgctgggaatcgtagct
agtcgcgttatggaccaagaaaacaagcccgttttggcaacgcaatttgatgaaaatagt
ggcgtgatgaagggatcaggtcgaagtccagaaggtttcaacctctttgtcgctttaaac
aagcataaagacctctttacagcctttggtgggcatgctcaagcgtgtggattttctatc
gaggaagaacaacttgataaactgacagaactcttgcaaacagaacctgccgagcaagag
tttgacccacaggcaccggttgtaaaaaattacgatttgaatttaacaattgctgattta
aatcttgatttaattaagaaaatcaatcagttggcaccgtttggaatggggaatcccaag
ccagttattaagttgaaaaatgtctcgttaacacaatctaaagcgattggtaaagatggc
agtcatttgaagacgatggtggctgacagtaaccgtcaagttgctgctattggttttggg
atgtttgctaaggaacagtccactgataccgatatttgcgatgtttatggtgagattggt
attaacgaatgggctggtcgtaagaatttgcaactaatgttagatgattttcaagtttca
ccagaagctcaaacaattgctgatttgaaagaagtttatcttgattatcgaaataaacga
ctttcaacagctattttgaatcattttgatagtattgttttcttcaatgaagtctattat
gaagccgctaagagatccgatgttaaagctaagttgattcgatatgacgaagagtgcgat
ggtaaaaatattttgatctatgatcgaccacataatattgaattattcaaaaattttatt
aaagaaaataaaacacaacatacagcgttatttttccatacagatttgacagcacgttat
ttaaaacctgatatggcaaagatgaaaacgcttttgaaatatttgtatagtcatcaaaat
attactgccgatggtatggatttggttgctcaatatttgaatttacaaaaaactgatgta
gatttttatttaaaagtgttttttgagttaaattttgttaaaatagtaaatggctttgtt
gaaaaagctgatgcttcacaacaacgcgaattgattgaatctccgacatatttaaagaga
ttacaacgcaatgatgtggaaaaaatattaattgaatccaactttgacgatctcttatct
tggatgagtgattacgattgccattgttag
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