Companilactobacillus zhachilii: D1B17_09390
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Entry
D1B17_09390 CDS
T06807
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
lzh
Companilactobacillus zhachilii
Pathway
lzh02020
Two-component system
lzh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lzh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D1B17_09390 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D1B17_09390 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lzh03021
]
D1B17_09390 (rpoN)
Transcription machinery [BR:
lzh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D1B17_09390 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
HTH_23
HTH_31
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AYE38835
UniProt:
A0A386PV54
LinkDB
All DBs
Position
753257..754537
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AA seq
426 aa
AA seq
DB search
MELKQNLNQKQVQGLSLTQGMRQSILILQSDAIDLADYLNEQSLENPLFDVRVNLDMPFI
DNEGSGSYQIKDEQQSLFEYLLDQVQLTMRKTPLRDLVVYLIEQLDPNGYLTLSDDEIFD
EVDDITPIMLLDAKTLLHQLDPPGIGARDLQECLYLQAEADNANKAIMSMLSDNFELFTK
HEWKKLKRALKISNAELQEDINFIQSLSANPGQRYTSQNEQYVVPELAVKKNGDKLTLSI
TKYGQPQLIFAEETYDNLVKSTDEDVKKYIRDKYNQYQTLEYNLQRRIDTVSIIGKCIVK
AQYKFFMQETDSLAPLLIRDVAQKLQMSESTVSRTINGKYIQTDFGIFELKQFFSRRSKV
TVGEAQSVDQVKNKIKGILNDEDKKKPLSDQKISDMLKEDGLQIARRTVAKYREQLGYPS
TSRRRI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggagcttaaacagaatttaaaccaaaaacaagttcaagggttatctttgacgcaaggg
atgcgccaatcaattttaattttgcaatcggatgccattgatttggctgattatttgaat
gaacagagtttggagaatccgctgtttgacgtgcgggtcaatttagatatgccatttatt
gataacgagggtagtggttcatatcaaattaaagatgagcaacaatcgttgtttgaatac
ttattagatcaagttcaattgacgatgcgtaaaacaccattacgtgatttggtagtttac
ttgattgagcagcttgatccgaatggttatttaacgctatcagatgatgaaatttttgat
gaggtagacgatattaccccaattatgttgttggatgcgaagactttgttgcatcaactc
gatcctcccgggataggggctcgtgacttacaagaatgtctttacttacaagctgaagct
gataatgctaataaagctattatgtcgatgttgagtgataattttgaattatttactaag
catgaatggaagaagttaaagcgtgctctaaaaatctccaatgctgaattacaagaggat
atcaattttattcagtcattatccgcaaatcctggtcaacgttatacatcacaaaatgaa
caatacgtcgttccagagttagctgttaagaaaaatggtgacaagttgacgttatcaata
actaaatatggtcaaccacagttgatttttgcggaggaaacgtatgataatttggttaaa
tcaactgatgaggatgttaagaagtatattcgggataaatataatcaatatcaaacattg
gaatataatttacaacgccgcatagatacagtctcaattattggcaagtgtatcgtgaag
gctcaatataaattcttcatgcaagaaacagattcattggcaccattattgattcgggat
gtggcacaaaagttacaaatgagtgaatcaaccgttagtcggacaattaatggcaagtat
attcaaactgactttggtatttttgaattgaaacaattcttctcacgtcgtagtaaagtc
actgtaggtgaagcccaatcggttgatcaagtgaagaataaaatcaaaggtattttgaac
gatgaagataagaagaaaccattgagtgaccaaaagatttccgatatgttgaaggaagat
ggcttacagattgccagaagaactgtggcaaaatatcgtgagcaattaggttatccatca
acaagccgccgtcgaatttaa
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