KEGG   Companilactobacillus zhachilii: D1B17_09390
Entry
D1B17_09390       CDS       T06807                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
lzh  Companilactobacillus zhachilii
Pathway
lzh02020  Two-component system
lzh02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lzh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    D1B17_09390 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    D1B17_09390 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lzh03021]
    D1B17_09390 (rpoN)
Transcription machinery [BR:lzh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D1B17_09390 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID LacI HTH_23 HTH_31 HTH_3
Other DBs
NCBI-ProteinID: AYE38835
UniProt: A0A386PV54
LinkDB
Position
753257..754537
AA seq 426 aa
MELKQNLNQKQVQGLSLTQGMRQSILILQSDAIDLADYLNEQSLENPLFDVRVNLDMPFI
DNEGSGSYQIKDEQQSLFEYLLDQVQLTMRKTPLRDLVVYLIEQLDPNGYLTLSDDEIFD
EVDDITPIMLLDAKTLLHQLDPPGIGARDLQECLYLQAEADNANKAIMSMLSDNFELFTK
HEWKKLKRALKISNAELQEDINFIQSLSANPGQRYTSQNEQYVVPELAVKKNGDKLTLSI
TKYGQPQLIFAEETYDNLVKSTDEDVKKYIRDKYNQYQTLEYNLQRRIDTVSIIGKCIVK
AQYKFFMQETDSLAPLLIRDVAQKLQMSESTVSRTINGKYIQTDFGIFELKQFFSRRSKV
TVGEAQSVDQVKNKIKGILNDEDKKKPLSDQKISDMLKEDGLQIARRTVAKYREQLGYPS
TSRRRI
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggagcttaaacagaatttaaaccaaaaacaagttcaagggttatctttgacgcaaggg
atgcgccaatcaattttaattttgcaatcggatgccattgatttggctgattatttgaat
gaacagagtttggagaatccgctgtttgacgtgcgggtcaatttagatatgccatttatt
gataacgagggtagtggttcatatcaaattaaagatgagcaacaatcgttgtttgaatac
ttattagatcaagttcaattgacgatgcgtaaaacaccattacgtgatttggtagtttac
ttgattgagcagcttgatccgaatggttatttaacgctatcagatgatgaaatttttgat
gaggtagacgatattaccccaattatgttgttggatgcgaagactttgttgcatcaactc
gatcctcccgggataggggctcgtgacttacaagaatgtctttacttacaagctgaagct
gataatgctaataaagctattatgtcgatgttgagtgataattttgaattatttactaag
catgaatggaagaagttaaagcgtgctctaaaaatctccaatgctgaattacaagaggat
atcaattttattcagtcattatccgcaaatcctggtcaacgttatacatcacaaaatgaa
caatacgtcgttccagagttagctgttaagaaaaatggtgacaagttgacgttatcaata
actaaatatggtcaaccacagttgatttttgcggaggaaacgtatgataatttggttaaa
tcaactgatgaggatgttaagaagtatattcgggataaatataatcaatatcaaacattg
gaatataatttacaacgccgcatagatacagtctcaattattggcaagtgtatcgtgaag
gctcaatataaattcttcatgcaagaaacagattcattggcaccattattgattcgggat
gtggcacaaaagttacaaatgagtgaatcaaccgttagtcggacaattaatggcaagtat
attcaaactgactttggtatttttgaattgaaacaattcttctcacgtcgtagtaaagtc
actgtaggtgaagcccaatcggttgatcaagtgaagaataaaatcaaaggtattttgaac
gatgaagataagaagaaaccattgagtgaccaaaagatttccgatatgttgaaggaagat
ggcttacagattgccagaagaactgtggcaaaatatcgtgagcaattaggttatccatca
acaagccgccgtcgaatttaa

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