Companilactobacillus zhachilii: D1B17_09825
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Entry
D1B17_09825 CDS
T06807
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lzh
Companilactobacillus zhachilii
Pathway
lzh03420
Nucleotide excision repair
lzh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lzh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D1B17_09825 (pcrA)
03430 Mismatch repair
D1B17_09825 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lzh03400
]
D1B17_09825 (pcrA)
Enzymes [BR:
lzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1B17_09825 (pcrA)
DNA repair and recombination proteins [BR:
lzh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1B17_09825 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
D1B17_09825 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
MSSS
Motif
Other DBs
NCBI-ProteinID:
AYE39507
UniProt:
A0A386PYB4
LinkDB
All DBs
Position
648734..650968
Genome browser
AA seq
744 aa
AA seq
DB search
MLKGLNPEQQDAVKATEGPLLIMAGAGSGKTRVLTHRVAYLIEEKNIMPWHVLAITFTNK
AAKEMKERIGKLLDESASDVWVSTFHSLCVRILRRDIDKMGKPKTFTIADPSEQRTLMKQ
ILTKMNLDPKRYDPRAILGTISNAKNELLTPAEYAKDAASPYEQTVASVYDAYAKEMDRN
NSLDFDDLIMQTSELFDQNPDVLEKYQEKFQYIHVDEYQDTNEAQYKLVKQLGAKYRNVC
VVGDADQSIYGWRGANIQNIMNFEKDYPEATTIKLEQNYRSTKTILKAANEVINNNGNRK
PKDLWTDNQAGDKIKFYRGQNESDEALYVIDQIKKLQAEGFNYGDFAVLYRTNAQSRTFE
EKLMQANMPYKIIGGHKFYDRKEIKDILAYLRLIANHDDSMSFQRVINSPKRGIGPGTVE
KLQNYADEHSWSLLEAAENIELSPLAARPRKIIGSFAKVIDDLTKLSEDHSMTILMDHLL
EDSGYVEDLKQQNNLESQARIENIEELLTVTTQFDQAYEPDPDVDETRLTTFLTELSLVS
DQDDIEEDQKEVTLMTLHAAKGLEFPVVFLVGMEEGIFPLGRSLLKEDDLEEERRLAYVG
ITRAEKRLYLTNAVSRMLYGRLQNNPTSRFVEEIKDDALDRVNSNAGNVGRPGGKYPFDN
RKRNRHTAATTATFQSPTLRSKGASGAEKLHWTVGDKVEHKKWGQGTVVKVNGEGQNAEL
DVAFKSEGVKRLLAEYAPIKKVTD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaggtcttaaccctgagcaacaggatgcagttaaggctacggaaggaccactt
ttgatcatggctggtgccggttctggtaaaactcgtgttttaactcaccgtgtggcttac
ttgattgaagaaaagaatattatgccttggcatgttttagctattacctttactaataag
gctgctaaggaaatgaaagaaagaattggcaaattgctagatgaatcagctagtgatgtt
tgggtttcaactttccactctctttgtgtaagaattttaagaagagatatcgataagatg
ggtaagcctaagacgtttacgattgctgatccaagtgaacaacgaactttgatgaaacaa
atcttaactaaaatgaacttggatcctaagcgctatgatccacgggctattttgggtaca
atcagtaatgctaaaaatgaattgctgacgcccgccgaatacgccaaagatgctgcttca
ccatatgaacaaacggttgctagtgtttatgatgcttatgctaaggaaatggatcgaaat
aattcgcttgattttgatgatttgattatgcaaacaagtgaactatttgaccaaaatcca
gatgtcttagagaagtatcaagaaaagttccaatacattcatgttgatgaatatcaggat
actaacgaggctcaatataagctggttaagcaattgggtgctaagtatcgtaatgtctgt
gtcgttggtgatgctgaccaaagtatttatggttggcgtggtgctaatattcaaaatatt
atgaactttgaaaaagattatccagaagctacaacgattaaattggaacaaaattatcgt
tcaacgaagacgattttaaaagctgccaatgaggttattaacaacaatggtaaccgtaag
cctaaagacttgtggactgataatcaagctggcgataagattaaattttatcgtggacaa
aatgaatctgacgaagctttgtatgtgattgatcaaattaagaaattgcaagcggaaggt
ttcaattacggtgattttgcagtgctttatcgaactaacgcccaatcacgtacctttgaa
gagaaacttatgcaagctaatatgccatacaagattattggtgggcataagttctacgat
cgtaaggaaattaaggatatcttggcttacctacggttgattgctaaccatgatgattca
atgagtttccaaagagttatcaacagtcctaaacgtgggattggtccgggaacagttgag
aaacttcaaaattatgcagatgaacatagttggtcattactggaagcggctgaaaatatt
gaactttcaccattggctgctcgtcctcgcaagattatcggtagttttgccaaggtaatc
gatgatttaactaaattgtctgaagaccattcaatgactattttaatggatcatttgttg
gaagattcaggttatgtagaagatttgaaacaacaaaataatctggaatcacaagcaaga
atcgaaaatattgaggaacttttaactgttacaacgcaatttgatcaagcatatgagcca
gacccagatgttgatgaaactcgtttgacgactttcttaacggagttgtcattagtcagt
gatcaagatgatattgaagaagatcaaaaggaagttacgttgatgactttgcatgccgct
aagggattggaatttccagttgtcttcttggttggtatggaagaggggattttcccatta
ggtcgttcactgcttaaagaagatgacctcgaagaagaacgtcgcttggcttacgttgga
atcacgcgtgctgaaaagcgcttgtatctaaccaatgctgttagccgcatgctttatggt
cgtttacaaaacaatcctacttcaagattcgttgaagagattaaggatgatgccctcgac
cgggttaatagtaatgctggtaatgtgggacgtcctggtggaaaatatccatttgataat
cgcaaacgaaatcgtcatacggctgcgacaacggcaactttccaatcaccaactttgaga
tctaaaggtgcatctggtgccgaaaaactgcactggactgttggtgataaggttgaacat
aagaagtggggtcaaggaactgtcgtcaaagttaatggtgaaggtcaaaatgctgagtta
gatgttgctttcaagagtgaaggtgttaagcgtctcttggctgaatatgctccaattaaa
aaagttactgattaa
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integrated database retrieval system
