Levilactobacillus zymae: LZ3411_0984
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Entry
LZ3411_0984 CDS
T05206
Name
(GenBank) RecD-like DNA helicase YrrC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lzy
Levilactobacillus zymae
Pathway
lzy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lzy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LZ3411_0984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lzy03400
]
LZ3411_0984
Enzymes [BR:
lzy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LZ3411_0984
DNA repair and recombination proteins [BR:
lzy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LZ3411_0984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
DUF815
UvrD-helicase
AAA_22
nSTAND3
TsaE
AAA
Mg_chelatase
AAA_28
HTH_IclR
AAA_16
UvrD_C
AAA_29
AAA_25
AAA_18
Zeta_toxin
RsgA_GTPase
MeaB
NPHP3_N
AAA_12
Rad17
RecR_HhH
HHH
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
SMS14034
UniProt:
A0A1Y6K0F7
LinkDB
All DBs
Position
I:1097562..1100075
Genome browser
AA seq
837 aa
AA seq
DB search
MATESLDLLATDNGTQADYVVGTVSAVFFASQDSFYKVMLVKISETSLDWHEDEIVVTGN
FADIKDDVAYRFTGKRVEHPKYGVQFQADNYQNETPTSRNGVIAYLSGEDFPGVGKKTAE
RVVDALGNDAIEAILNDHTVLDPLGLSPKVTQTLIDNLQANNGMEQIIIGLNGYGFGSTL
AAAIYNHYQEKTLDVIHENPYRLAEDIAGVSFKRADQIATQLGYAPDRPERLRAGILQTL
RDLSVANGDTYTTAKPLLTNALGLLENSRNVRLNPQDLATQLLELAKQQKVVGDDQRIYL
KPLYDDEWQIAEHLNRLLQADDDDPAAKFNDEAIQKQLRIVEKQTDITYDDSQTAALTAA
IRAKVLLLTGGPGTGKTTIIRGLVQLYARLHELSLDVNEYKERPFPILLAAPTGRAAKRM
SETTGLPASTIHRLLGLTGREADIEDATTKDLEGGLLIVDEVSMVDVSLMKVLLRAAPVG
MQVIFVGDKDQLPSVGPGQVFHDLLASDQLTKIQLDTIYRQGDGSSIIPLAHAIKNGQLP
ADFTQNQPDRSFIACHANQVADVIDQIVGKAHQKGFSAADIQVLAPMYRGTAGIDRLNDI
LQGILNPKKSERTKEVEFRHQRFRIGDKVLHLVNSPENNVFNGDIGTITGIDLASDKHSK
VKSDQLTIAFEQTEVTYARNDWIRLTLAYCMSIHKAQGSEFKLVILPMVSQYSRMLQRNL
LYTAVTRAAQMLILVGEPQAFTACVENLSVNRHTTLTQRIQAVLAPDAPQTPTAGETPTS
TAPTPPTTAAEASPEQPVTQPTTPPDYRLTPELTLAGQIDPMIGMQGITPQQFMPRA
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgaatctttggacttactcgcaaccgataacggcacgcaggccgactacgtg
gtgggcacggtgagtgcggtcttctttgccagccaggatagtttctataaggtcatgctg
gtcaaaatcagcgagaccagtttagattggcacgaagacgaaatcgtggtcaccggtaac
tttgcggatatcaaagacgacgtggcctaccggttcaccggtaagcgggtggaacacccc
aagtacggggtccagttccaagcggacaactaccaaaacgaaacgccgacctcgcggaac
ggtgtgatcgcctacctgagtggcgaagacttcccgggcgtcggtaagaagactgccgaa
cgggtggtggacgccctgggcaacgacgccatcgaggccattttaaacgaccacacggtg
ctggacccgttggggctatcgccgaaggtcacccagacgctgatcgataacctgcaggcc
aataacggcatggagcagatcatcattgggttaaacggctacggctttgggagcacctta
gccgccgcgatttataaccactaccaggaaaaaacgctcgacgtgatccacgaaaatccg
taccgactagccgaggacatcgccggggtgagtttcaaacgcgccgaccagattgccacg
cagctggggtacgccccggaccgccccgagcggttacgcgccggcattctccagacgcta
cgggacctgtccgtggccaacggggacacctataccacggctaaacccttgttgactaac
gcgttgggcctattagagaatagccgcaacgtgcggttgaatccccaggacctagcgacc
cagcttctagagttagccaagcagcaaaaggtcgtgggtgacgaccagcgcatctactta
aaaccgttgtacgacgacgaatggcaaatcgctgaacacctgaaccggctcttacaggcc
gacgatgacgacccggcggccaagttcaacgacgaggccattcaaaaacaattacgtatc
gtcgaaaaacaaacggacatcacctacgacgactcccagaccgcagcgctgaccgcggcg
attcgggccaaggtcttgctactgaccggggggccggggaccggaaagaccacgatcatt
cgcggtttggtccagttatatgcccggctacacgagctttctttagacgttaacgagtac
aaggaacggccgtttccgattctgttggcggccccgaccggccgggccgctaagcggatg
agtgagaccaccggcctgcccgccagtacgattcaccgcttattgggattgaccggtcgc
gaagccgacatcgaagacgccaccaccaaggatttagagggcgggttactgatcgtcgac
gaggtgtcgatggtcgatgtctcgctgatgaaggtcctgttacgggccgcgccggtgggc
atgcaggtgatcttcgtgggggataaggaccagctgccttctgtggggccgggccaggtc
tttcacgatctcttagccagcgaccaactgaccaagattcagctggataccatttaccgg
cagggggatgggtcgtcgatcattccgttggcccacgccatcaaaaacgggcaactcccc
gccgacttcacccagaatcagccggaccggtcgtttatcgcctgtcacgccaaccaggtg
gccgacgtgatcgaccaaatcgtggggaaggcccaccagaagggctttagcgccgccgac
atccaggtgctggccccgatgtaccggggaacggccggcatcgaccggctcaacgacatc
ctgcagggaattttgaaccccaagaagagcgagcgcaccaaggaagttgagtttcgccat
cagcgttttcggattggtgataaggtcttacacctggtcaacagccccgaaaacaacgtg
tttaacggcgatatcgggaccattaccgggatcgacttggccagtgataaacacagtaag
gtcaagagcgaccagttgacgatcgccttcgagcagaccgaggtcacttacgcgcgcaac
gactggattcgcttgaccctagcctactgcatgtcaattcacaaagcccaggggtccgaa
tttaagctggtcatcctcccgatggtcagtcagtacagccgcatgctccaacgtaacctg
ctgtacacggcggtgaccagagcggcgcagatgctgatcctggtaggcgagccgcaggcc
tttaccgcgtgcgtggaaaacttgtcggtcaaccggcacaccacgttgacccaacgcatc
caggcggtcttagcaccggatgccccgcaaacgccgactgctggtgaaacgccaacatcg
accgccccgacaccgcctactacggcggccgaggcttcaccggagcagccggtcactcag
ccaacaacgccaccggattaccgcttaacgccggagttgacgttggccgggcaaatcgat
ccgatgattggcatgcagggcatcacgccccaacaatttatgccccgggcctaa
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