Levilactobacillus zymae: LZ3411_1573
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Entry
LZ3411_1573 CDS
T05206
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lzy
Levilactobacillus zymae
Brite
KEGG Orthology (KO) [BR:
lzy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lzy03019
]
LZ3411_1573
03009 Ribosome biogenesis [BR:
lzy03009
]
LZ3411_1573
Enzymes [BR:
lzy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LZ3411_1573
Messenger RNA biogenesis [BR:
lzy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LZ3411_1573
Ribosome biogenesis [BR:
lzy03009
]
Prokaryotic type
rRNA helicases
LZ3411_1573
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
SMS14623
UniProt:
A0A1Y6K0K7
LinkDB
All DBs
Position
I:complement(1709689..1711047)
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AA seq
452 aa
AA seq
DB search
MTATFNEFHLQPYLMTALQKIGFKQPTPVQEKLIPIIAAGKDVVGQSQTGSGKTHTFLLP
IFNQLTSDNQVQAVITTPSRELAYQIHSAAEQLAAEAPFEIRIGNYVGGTDKQRQLNKLH
NFQPQLVIGTPGRVMDLIQSDALDVHTARQFVVDEADMTLDLGFLDQVDKIASRMPKNLQ
MMVFSATIPQKLNPFLRKYLNHPVIEEIPASAIISDTIDNWLISTKGQDRNRLIYQLITM
GEPYLVLIFANTKTRVEELHDYLKNQGLKVAMIHGGIKPRERKRVMREVKNLQYQYVVAT
DLAARGIDIEGVSHVINDDIPEDLDFFIHRVGRTGRQGMPGTAITLYSPGEEKLVSEIET
LGIHFEPKRISNGEIVDSYDRNRRTKRRKSTQHLDPTLIGMVKKKKKKIKPGYKHQIKQA
IHAKKDQDKRIAARAAARAERKRRKRDSDRYQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaacatttaacgagtttcatttgcagccatatttaatgacggcgttacagaag
attgggttcaaacaacccacacccgttcaagaaaaattgattcccatcatcgccgccggt
aaggacgtcgtgggtcagtcccagacggggagtggtaagacccatacctttttactgcca
atctttaaccaattgaccagtgataaccaggtccaggccgtgatcaccacgcctagccgg
gaactggcctatcagattcacagtgcggccgaacagttagccgccgaagcgccgtttgag
attcgcatcggcaactatgtcggggggaccgacaaacagcggcaattgaacaagctgcat
aatttccagccgcaactggtcatcgggacgcccggacgggtcatggatttgatccagtcc
gacgccttagacgttcacacggcgcggcagttcgtggtggacgaagccgacatgacgctg
gaccttgggttcttggaccaggtcgataagattgccagccggatgccgaagaacctgcaa
atgatggtcttttcggcgacgattccgcaaaaacttaacccgttcttacgtaagtatctg
aaccatcccgtgatcgaggaaatcccggcatcggccatcatcagtgacaccatcgataac
tggttgatttccaccaagggtcaggaccgcaaccggttgatctaccaactgattaccatg
ggcgaaccctacctggtcttgatctttgccaacaccaagacccgggtcgaagaattacac
gactacctgaagaatcagggcttaaaggttgccatgattcacgggggtatcaagccgcgg
gaacgaaagcgggtcatgcgtgaggtcaagaacctgcaataccaatacgtcgtggcgacc
gatttggccgcgcgggggatcgatatcgaaggggtctcgcacgtgatcaacgacgatatt
cccgaagacctcgactttttcattcaccgggtcggccggacgggccggcaggggatgccg
gggacggccatcaccctatactcgccgggcgaagaaaagctggtctccgagattgaaacg
ctggggattcactttgaacctaagcgcatcagtaacggtgagatcgtcgattcgtacgac
cgaaaccgccggaccaagcggcgcaagtccacacaacatctggacccgacgctgattggg
atggtcaagaagaagaaaaagaagattaagccagggtacaaacaccaaatcaagcaggcc
atccacgccaagaaagaccaggacaagcggattgccgccagagcggccgccagagcggaa
cgcaagcggcgtaagcgcgattcggatcgctatcaataa
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