Levilactobacillus zymae: LZ3411_1987
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Entry
LZ3411_1987 CDS
T05206
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lzy
Levilactobacillus zymae
Brite
KEGG Orthology (KO) [BR:
lzy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lzy03400
]
LZ3411_1987
DNA repair and recombination proteins [BR:
lzy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LZ3411_1987
Archaeal homologous recombinant proteins
LZ3411_1987
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
SMS15037
LinkDB
All DBs
Position
I:complement(2136947..2140114)
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AA seq
1055 aa
AA seq
DB search
MRPLSLHLEFFGPYRDTTVDFTKFATTPLFLISGKTGSGKTTIFDGMCYALFDQTSGTDR
EAPAMRSDFATPHDRTRVEFWFTHRDRRYQIVREPAQTLAKKRGTGLTAVTASVTLTVWH
DDTEEKQLTKIGQVRDFLQDLLKMDGKQFAQIVLLPQGQFRRFLVADSDAKAQVLEQLFD
TAVYARWADRLKAQLRQSQRANQAALADLDHVQNELQWTPANQGPASDLQANHQTADLLK
LMAQQQTATREREQTLITQLKAAQGTVTDLTRQDTQEEQFLADQQRLQTTLTAQTALKQR
EPAMAQLRAQLTELEWVQGLRPQWQTWQTAQTAVTQRQAARDQRQQHVTQAQASLAQAQT
AKQAAAELPAKITALQDQLAQQATIKPLYQQIAQLQKQQTAAQTTQQRTQAEVQRLTTAL
AATTTAQKQAQALIDQQGTWYDQSQTLQRTVATYADWQQRLTQLTADQQDLTVQTAQITT
LTAQAKTARTAADQAQATAEDRYQARLRAQIAELSAQLTPGSPCPVCGATTHPHPAVSTA
TTPVTAAMVKQAQQAATKAQQAATQLATQLTQQQTALAQAQAAVTEQATTLKHDMAAKLN
VATDASLTAFSTALGQAQTAVQQQETQVQQALAQVRQAQAQLTQLQATAQTQQTELKQAQ
EAAQAAQTQVTRLGVELTTQQRQLPTDALTLREFTELEQTRQAQLATHQRDWTALEQQVT
AATQALAVAQSDLQTATDELAQSQQRVTTAQAAVTAAMAAHELALTPATTATVTQQLAQL
DQVPTYRQQLQDFRTAQTQATATIAELRQRLADQAQPDRAKTQAALTAAQAQVTQLQADR
YAAQQQWQRNAELVQRLQQQLAAQATALQQTQALDELAGVLNGDGPNSKLGLERYVLQTY
LRQILLVGNHRLQQLTNGRYQFVIDDAPAASKKYSGLEINVYDDHVGEQRSVHTLSGGES
FIAALALALALGEVIQRTTGSVDVDALFIDEGFGSLDEDALMTALESLETIEGRHRMIGI
ISHVSELRAQVPNQLQVVAQGNGESHLKYQIHENG
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgagaccattaagcttacacctagaattcttcggaccgtaccgggatacgaccgtcgac
ttcaccaagtttgccaccacgccgctcttcttgatcagcgggaagacggggagtggtaaa
actaccatcttcgacgggatgtgctacgcgttgtttgaccagacgtcggggaccgaccgg
gaggccccggcgatgcgttcggattttgcgaccccgcatgaccgcacccgcgtggaattt
tggtttacccaccgcgaccggcggtaccaaatcgtgcgggaacccgcccagaccctggcg
aagaagcggggcaccgggttgaccgccgtcacggctagcgtgacgctgaccgtgtggcac
gacgacactgaagaaaagcagttgaccaagatcgggcaggtccgggactttttgcaggac
ctgttgaagatggacggcaagcagttcgcccaaatcgtgttgctcccccaaggtcaattt
cgccggttcctggtggcggatagtgacgccaaggcccaggtgctcgaacaactcttcgat
acggcagtctacgcgcgctgggcggaccgcctcaaggcccaattgcgacaaagccaacgg
gccaatcaagcagccctggccgacttggatcacgtgcaaaacgagctacaatggacgccg
gccaatcagggaccggccagtgacttgcaagccaatcatcagaccgccgacttgttaaag
ctgatggcccaacaacagacggcgacgcgggaacgtgagcagacgctgattacccaattg
aaagcggcgcaaggcaccgtgacggacttaacgcggcaggacacccaagaagaacaattt
ttggccgaccagcagcgcttgcagaccactttgacggcccaaacggcgttaaagcagcgg
gagccagccatggcccaattgcgcgctcaactcaccgaattggagtgggttcaagggtta
cgtccgcagtggcagacgtggcaaacggcgcagaccgccgttactcaacggcaggcggca
cgggaccaacgccagcagcacgttacccaggcccaagccagcctagctcaggcccaaacc
gccaagcaggccgccgcggagttaccggcaaagataacggccttacaggaccaacttgcc
caacaagcaaccatcaagccactttaccagcaaatcgcccaactacagaaacagcaaacc
gccgcgcaaaccacacagcaacggacgcaagcggaagttcaacgccttacgacggcactg
gccgccacgaccacggcccaaaagcaagcccaagcactgattgaccaacagggcacctgg
tacgaccagagtcagacgttacaacgaacggtcgcgacttacgccgattggcaacagcgc
ttgacccagttgacggcggaccaacaagacctaaccgttcagacggcccaaatcactacg
ctaacggcgcaggctaaaacggcccgcaccgccgccgaccaggcgcaggccacggcggaa
gaccggtatcaggcgcggttgcgagcccaaatcgccgaattgagtgctcagttaacgccg
gggagtccgtgtcccgtttgcggggccacgacccatccccatcccgcggtcagcacggcc
acgacgccggtaacggcggccatggtcaagcaggcccagcaagccgctaccaaggcgcaa
caagcggccacccagttggccacgcaactgacgcaacaacaaacggcgctggcccaggcg
caggccgccgtgacggaacaagcgacgacgttgaaacacgacatggccgctaaactgaat
gtggcgaccgacgcgtcattgaccgcgtttagtacggcgctaggtcaagctcagacggcg
gttcagcagcaggagacccaggtgcaacaggcgttggcccaggtccgacaggcgcaagcg
caactcacgcagctgcaagccacagcccagacccagcagacggagttaaagcaggcgcag
gaagcggcacaagcggcgcaaacgcaagtgacgcgactgggcgtcgaacttaccacgcag
caacggcaattgccgacggatgccctgacgctccgggagtttaccgaactggaacagacc
cggcaggcgcaattggccacccaccaacgggactggaccgcgctagaacaacaagtcacc
gccgccacacaggcgttggccgttgcccaaagcgacttgcagacggccactgacgaactg
gctcaaagtcagcaacgggtgacgaccgcccaagccgccgttaccgccgctatggccgcc
cacgagttggcgctgacgcccgcaaccacggcaacggtgacccagcagttggcccaacta
gaccaagtgccgacctaccggcaacaattgcaggacttccgcacggcccagacccaagcc
accgcaaccatcgcggagttacggcaacggttagccgaccaggcacaaccggaccgggcc
aagacccaggcggcgttgaccgccgcccaagcccaggtcacccagctccaggcggaccgg
tacgccgcccagcagcagtggcagcggaatgcggaattggttcaacgcctgcaacaacaa
cttgccgcgcaggcaaccgctttacagcagacccaagccttagacgaattggcgggcgtc
ttgaacggggacggtccgaatagcaagttgggcttggaacgttatgtgcttcagacctat
ctgcgccagattttactggtaggtaatcatcgcctccagcaactcaccaacggtcggtac
cagtttgtgatcgacgatgcccccgcggcctctaagaagtattcggggctggaaatcaac
gtctatgacgaccacgtaggggaacaacggagcgtacacaccctttccggcggggaaagc
ttcattgcggccctcgctttagccttggcactgggtgaagttatccaacggaccaccgga
agcgtggacgtcgacgcgttgttcatcgatgaaggcttcggttcgctggacgaggacgcc
ctgatgaccgcgctagagtcactagagacgatcgaaggccggcaccggatgatcggtatc
attagccacgtgagcgaattacgtgcgcaggtgccgaatcagttgcaggtcgtggcgcaa
ggaaacggggaaagtcacctgaagtatcagattcacgaaaacgggtaa
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