Levilactobacillus zymae: LZ3411_2388
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Entry
LZ3411_2388 CDS
T05206
Name
(GenBank) ATP-dependent nuclease, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lzy
Levilactobacillus zymae
Brite
KEGG Orthology (KO) [BR:
lzy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lzy03400
]
LZ3411_2388
Enzymes [BR:
lzy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LZ3411_2388
DNA repair and recombination proteins [BR:
lzy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LZ3411_2388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
AAA_12
DUF2059
ResIII
GxGYxYP_N
Motif
Other DBs
NCBI-ProteinID:
SMS15438
UniProt:
A0A1Y6JZV2
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All DBs
Position
I:complement(2593671..2597444)
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AA seq
1257 aa
AA seq
DB search
MSSHFQFTPSQDQAIHQEGTDLLVSASAGSGKTRVLVQRVIERLKGGTGIDHILIVTFTK
AAAAEMRDRIQTALRQELAATQGNSQRQQFYLRQLNLLPVADISTLDAFCLRVLQRYYYV
IDYDPVFRLLADNTESSLLRDEVWTDLREQLYADDQDGQFARLTENFSGDRNDDGLTELV
QRVYTFADAAPDPKAWLAALPQAYQLETDQLTASRFYQMQLQPLLADQFKQIRADLASAQ
EMAENVGLVKPADHLADLCEAWDQLIAELANSQWNDLRDRVQSFKWGRMPPVGKTDENRP
VLDDLKKTYYDPARKQWKTLLETYFLQNETDVRATMQASKELVTELARVVSAYRDAYLQE
KFRRHVLDFADVEHAALEILSQDTPDSQHVRDQMRDQYAEIMVDEYQDTNSLQEAILTAI
AQPAPTGNRFMVGDVKQSIYRFRQADPTLFMDKADRYATDAQAGRTITLAENFRSMENVD
DFTNLVFKQLMNRELGEVAYTGDALLKFGATYYPADVQSTAELLVYLSDEPTSAGDGEAM
DATFQVDDKHQGEVLLTGKKIQELIAAKTPIYDRDAKVTRPIEYRDITLLTPTRTNNLII
TDELRRLDIPVVVNDAQNYFKTTEIQIMMALLRIIDNPYQDIPLAAVLRSPIVGLNENEL
ALLRINQRTGDYFQAVLHFQQTYNDHQSSDMQATVYRKISHFLEQLREFRDIAQQNQLVT
LIWRIYQETGFLDYVGGMPAGAQRQANLHALYERAQTYEHSSFKGLFQFVRFVERLQERD
DDLASANVQTATNAVSVMTIHGSKGLEFPVVFLMDASRQFNRQDQQGNYVLSGKDGIGID
YLNTRTRVKTPSLQKLLTAQAISRASLAEEMRKLYVALTRAEARLYIVGSAKSREQALTT
WSQAFQSEDLVLPATMREKSTVANYLDWVGMCLIRTPQAQKQDWQEDHAAISPLAGDPTH
FGVTFATAADLAPSEPVATTQMDWLDQAQAAADQLTVTPVDDAALQQVMAFQYPHQAATV
TTAYQSVSEAKRLFEEPDRALMAESQTTPTGQAGRRYVSHDFARPEFLQTVPAPLPTEIG
TATHLVLQQLDVTTLPTVERIQALIDRLVAGKILTAEVAQRIDPQAILQFYATPVGQAIL
AHPDQLHREVPFSLLMPAKSLFRDFQERESQVLVHGIVDGYLTTPDGLILFDYKTDHVNS
RDQQAGVAKLVDRYAGQVNLYALALQQMTGQAILHQYLYLLEIGKLVAVAPKPLQTD
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcattttcaatttacgccgagtcaggaccaggccattcaccaagagggaact
gatttgttagtttccgcttcggcggggtccgggaagacgcgggtactggtccaacgggtc
atcgaacgcctcaagggcggaaccgggatcgaccacatcctcatcgtgacctttaccaag
gccgccgcggccgaaatgcgcgaccgaattcaaaccgccttgcggcaggaactcgcggcg
acgcaggggaacagtcagcggcaacaattttatctgcgacaactgaacctgctcccggtc
gccgacatcagtacgctggatgccttttgtttacgcgtcctgcaacggtactactacgtc
atcgattacgatccagtcttccggttactcgccgacaacaccgaaagtagcttgttgcgt
gacgaggtctggacggacctgcgcgagcaactttacgctgacgatcaggacggccagttt
gcccggttgacggaaaacttctccggggaccgcaacgatgacgggttaacggaactggtc
caacgcgtttacacctttgccgacgcggccccagaccctaaggcttggctggcggcgtta
ccgcaggcctatcagctggagactgaccaactcacggcgagtcgcttctaccaaatgcaa
ctccaaccgttattggccgaccagttcaaacagattcgcgccgacctggcgagtgcccag
gagatggccgagaacgtgggcttggtgaaaccggcggaccacttggccgacctgtgcgag
gcgtgggatcagctgattgccgaactggctaatagtcagtggaacgacctgcgtgaccgc
gttcagagtttcaaatgggggcggatgccaccggtcggcaagaccgacgaaaaccgcccg
gtcctcgacgacctcaagaagacctactacgaccccgcgcggaaacagtggaagacgtta
ctggaaacctacttccttcagaacgaaacggatgtgcgggcgaccatgcaagcgtccaag
gaattggtcaccgaactggcccgggtggtcagcgcctatcgggacgcctacctccaggag
aaattccggcggcacgtcttggattttgcggacgtggaacacgcggccttagaaatttta
agccaggacaccccggattcgcagcacgtccgcgaccagatgcgcgaccagtacgccgaa
atcatggtcgatgaatatcaggataccaacagtctgcaggaagccattctcacggcgatc
gcccaacccgcaccgacggggaaccgcttcatggtgggggacgtcaagcagtccatctac
cgtttccggcaggccgaccccacgctgttcatggataaggccgaccggtatgcgaccgac
gcgcaggccggtcgcaccatcacgttggccgaaaacttccggtcgatggaaaacgtcgac
gacttcaccaacctcgtgtttaaacaattaatgaaccgtgaactgggtgaggtggcctat
acgggcgacgctttgctgaagtttggggcgacctactaccccgctgacgtgcagagtacg
gccgaattgctggtctacctcagtgatgaacccacgtcggccggcgacggcgaggccatg
gacgccaccttccaggtcgacgacaaacaccagggcgaggtcttattgaccgggaagaag
attcaggaactgatcgcggccaagaccccgatttacgaccgggacgcgaaggtgacccgg
cccatcgagtaccgcgacatcacgctgttgacgccgacgcgcaccaacaacctgatcatt
accgatgaattacgccggttagacattcccgtggtggtcaacgacgcgcagaactatttc
aagaccaccgaaatccagatcatgatggccttgctgcgaattattgacaacccgtatcag
gatatcccgctggcggccgtgctccggtcacccatcgtggggcttaacgaaaacgaactg
gccctgctccgcatcaaccagcgcacgggcgactatttccaggcggtcttgcatttccag
caaacctataacgaccaccagagtagtgacatgcaggcgaccgtttaccgtaagatcagt
catttcttggaacaactccgggaatttcgcgacattgcccaacagaaccagctagtcacg
ttgatctggcgaatttaccaggagacgggctttctggactacgtcggggggatgcccgcg
ggagctcaacggcaggccaacctgcacgccctctacgaacgggcccaaacttacgaacac
agtagtttcaaggggttattccagttcgtacggttcgtggaacgactccaggaacgcgat
gacgacttggccagtgcgaacgtgcaaacggcgaccaacgcggtgtccgtgatgaccatt
cacgggagtaagggactggaatttccggtagtcttcttgatggatgcgtcgcggcaattc
aaccgtcaggaccaacagggcaactacgttctgagtgggaaggacggcatcggcatcgac
tacctcaacacccgcacccgggtcaagacaccgagcctccaaaaacttctgacggcgcaa
gccattagtcgggccagtctggccgaagaaatgcgaaaactctacgtggcgttaacgcgg
gcggaggcacgactctacatcgtggggtcggccaagagccgcgaacaagcgctgaccacc
tggagtcaggcctttcaatccgaggacctggtcttacccgcgaccatgcgggaaaagtcg
acggtggctaactacctagactgggtggggatgtgcctgatcagaacgccgcaagcccaa
aaacaggactggcaggaagaccacgcggccattagcccgttggcgggtgatccgacccac
tttggggtgacctttgccacggcggccgacctcgcccctagcgaaccggtcgccacgacc
cagatggactggttggaccaggcgcaagcggcagccgatcagctgaccgtcacgccggtc
gacgatgccgccttgcagcaagtcatggcctttcagtatccgcatcaggcggcgaccgtg
actacggcctaccaatccgtttcggaagccaaacggctcttcgaggaacccgacagggcg
ctgatggcggaaagccaaactacgcccacgggccaagccggccggcggtacgtgagccac
gactttgcccggcccgaattcctgcagaccgtgccggcgcccttaccgaccgaaatcggg
acggcgacccacttggtcttgcagcaattagatgtcacgacgcttcccacggtggaacgg
attcaggcgttgatcgatcggctggtcgccggcaagatcttaacggccgaggtggcacag
cggattgaccctcaggcgattctgcaattctacgccacgccggtggggcaggcgattctg
gcgcatcccgatcaactccacagagaagtgccgttctcgttattgatgccggccaaaagc
ttgttccgcgactttcaggaacgggagtcgcaggtcctggtccacggtatcgtcgatggt
tatttgacgacccccgacggtttgatcctgtttgactacaagaccgaccacgtcaacagc
cgcgaccagcaggctggcgtggccaagttggtcgaccggtacgccggtcaggtcaacctg
tacgccctcgcgctccaacagatgaccgggcaagcgattttgcaccaatacctgtatctc
ttagagattggtaaattggtggcggtcgccccgaaacccttacaaaccgactaa
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