Mycoplasmopsis agalactiae PG2: MAG2650
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Entry
MAG2650 CDS
T00536
Symbol
rpoD
Name
(GenBank) DNA directed RNA polymerase sigma factor(Sigma A)
KO
K03086
RNA polymerase primary sigma factor
Organism
maa
Mycoplasmopsis agalactiae PG2
Brite
KEGG Orthology (KO) [BR:
maa00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MAG2650 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maa03021
]
MAG2650 (rpoD)
Transcription machinery [BR:
maa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MAG2650 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
WHD_MCM8
Motif
Other DBs
NCBI-ProteinID:
CAL58963
UniProt:
A5IY54
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All DBs
Position
complement(306745..308274)
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AA seq
509 aa
AA seq
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MSKKSELKATVKLIKSHLKNLGKSTLTQEEVYEYLDSIKVEVPDDDMDIMLELLLEENIL
ADDFDDGDASFVNSDDIMDEVDAEKSMNKLDSSKSYDDSLDSKIQVKSNDTENLEDDSEY
SKLIGNYSDNSYDSYEEESEDFMVMDDDYHDSSYDEDDEEDEIVYKTDDKDQSATKSKRG
RKPKDKLSLDTLELEDFSAEEIDLSANLSVKKEDLKNKLTETNDIVKWYMRWIGKYGKLL
QPEEEFELATEMDKGGFKGKRARDKLIKRNLRLVINNAKKYKNRGLSFIDLISEGNSGII
KAVQKYNVNKGFKFSTYATWWIRQAITRAVADQSRTVRVPVHMVETINKITKIERELQQE
NGVDPTDEEIAQRYGNDFTAEKVRHIRKINIDPISLDKQIGKENDSSFSDFVKDESVVNP
VDYASHEELVETLNAILKDTLDADEYELICKRYGVGFDNNGEKYKVFSLEELALERNVSK
ERIRQIENKILRKLKSSPERSRYLKVFME
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaagtgaactaaaggcgacagttaaattaatcaagtctcaccttaaaaat
ttaggcaaaagtactttgactcaagaagaagtttatgagtacttagattcaattaaagta
gaagttcccgatgatgatatggacattatgttagaacttcttttagaagaaaatattctt
gcagatgattttgatgatggcgatgcttcatttgttaatagtgatgacattatggatgaa
gttgatgccgaaaagtctatgaacaagcttgattcgtcaaaatcatatgatgatagctta
gatagcaaaatacaagttaaatcaaatgatactgaaaatttagaagatgattcagaatat
tcaaaattaattggcaactatagcgataattcatatgattcatatgaagaagagtctgaa
gactttatggttatggatgatgattatcatgattcaagctatgatgaagatgacgaagaa
gacgaaatagtctataaaacagatgataaagaccaaagtgcaactaaaagtaaaagaggt
agaaaacctaaagataaacttagtttagatactttggaactagaagatttttcagctgaa
gaaattgatcttagcgctaatttatcagttaagaaagaagatcttaaaaataagcttact
gaaacaaatgatattgttaagtgatatatgcgttgaatcggtaagtatggaaaattatta
caacctgaagaagaatttgagctagccactgaaatggataaaggtggctttaaaggtaaa
agagctagagataagctaattaaaagaaacttacgtttagttattaataatgctaaaaag
tacaaaaatagaggtttaagcttcattgacttaatttctgaaggaaattcaggaattatt
aaggctgtacaaaagtacaacgtaaataaaggctttaagttttcaacctatgcaacttga
tgaattcgtcaagcaattactagagcagtagctgatcaatcaagaactgtccgtgtacct
gttcatatggtggaaacaattaacaaaataacaaaaattgaacgcgagttacagcaagaa
aatggtgttgatccaactgatgaagaaattgcacaaagatacggcaatgactttactgct
gaaaaagttagacacattagaaaaattaacattgaccctatttctttagataagcaaata
ggaaaagaaaacgattcatcatttagtgactttgttaaagatgaaagtgttgtaaaccct
gttgactatgcttcacatgaagaattagttgaaaccctaaatgcaatattaaaagacaca
cttgatgcagatgaatatgaattaatttgcaaaagatatggcgttggttttgataataat
ggcgaaaaatataaagtgttttcattagaagaattagctttagaaagaaatgtttctaaa
gaaagaattagacaaattgaaaacaaaattttaagaaagcttaagagtagtcctgaaaga
agcagatacttaaaagtgttcatggaatag
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