KEGG   Mycoplasmopsis agalactiae PG2: MAG6810
Entry
MAG6810           CDS       T00536                                 
Name
(GenBank) Conserved hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
maa  Mycoplasmopsis agalactiae PG2
Pathway
maa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:maa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MAG6810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maa03019]
    MAG6810
Messenger RNA biogenesis [BR:maa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MAG6810
SSDB
Motif
Pfam: RMMBL RNase_J_b_CASP RNase_J_C
Other DBs
NCBI-ProteinID: CAL59381
UniProt: A5IZC2
LinkDB
Position
complement(795984..797654)
AA seq 556 aa
MNHINIFALGGLDENGKNCYILETFDEKGENKKIYVINSGAKVPINSSNKIDTLIPNFNY
LIKNKDAIQGVFVTDVKNDSFSALPWLLMKMPTVPVYTSKFNKVLIMERLSKYKLDLKKV
KINILDRPTKVGDIFVNPIELAGSMPGHIGLDFITPSGDYLFMFNFVEANLGIYGNLDFD
EMPKKFFAKRKIKALIVDSGNSNQNCRAADKIVLPRNVREAFFSARPDQRIIVGAYDEEM
YSISQILDFAYEAKRPVIAYGKTYGQVLSLIKSVVPDLRLPKVLDYKYANKVKNAVILVT
GTVERLHSRFARITDNNDVYLKLQENDTVIMIAPAINGLESLEAVVLDDIARVSPKVMEL
NNFEFFHHHPAREDLAKLINILKPEYVIPVQGLYRYLQDAQRYIVKNVGFNSKNVLVLQN
GQVAHFDNGKLGSYKRKIKEVGDVIVDGFGVGDINTEVLNEREVLGREGVVLVAIRYNPI
KKKIVGKVQINTVGVISKEEKSEANDLIKATLLNVIEGKKFESLREFQNVCRQAIRKRIF
KVFSKEPIVVSAVSTQ
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgaaccatattaatatatttgctcttggtggacttgatgaaaatggcaaaaattgctac
attttggaaacatttgatgaaaaaggcgaaaacaaaaaaatatatgtaattaactcaggt
gctaaagttcctattaattcaagcaataaaatcgacactttgattcctaatttcaactat
ttaattaaaaacaaggatgccatacaaggcgtttttgttactgatgttaaaaatgattca
tttagtgcacttccatgattattaatgaaaatgccaacagtgcctgtttatacatctaag
ttcaataaagtattaattatggaaagattgtctaagtataagttagacttgaaaaaagtt
aagattaatattttagacaggcctaccaaagttggcgacatttttgttaatccaattgaa
ttagcaggctcaatgccaggacacattggtcttgattttattactcctagtggtgattat
ttgtttatgttcaattttgttgaagcaaatttaggtatatatggaaacttagattttgat
gaaatgcctaaaaaattctttgcaaaaagaaaaattaaggcattaatagttgattcagga
aactcaaatcaaaattgtagagcagctgacaaaattgttttaccaagaaatgtaagagaa
gcattttttagtgcaagacctgatcaaagaatcattgttggtgcttatgatgaagaaatg
tattcgataagtcaaattttagattttgcatatgaagcaaaaagaccagtaatagcttat
ggaaaaacatatggacaagttttaagtttgattaagtcagtagttcctgatttgagattg
cctaaagttttagattataagtatgctaataaagtaaaaaatgcagttattttagttact
ggaactgtcgaaagattgcactcaagatttgcaagaattacggacaacaatgatgtttat
ttaaaacttcaagaaaatgacactgttataatgattgctcctgcaatcaatggattagag
tctttagaagctgtagtgcttgatgatattgctagagtcagtcctaaggttatggagctt
aataattttgaatttttccaccaccatccagctagagaagatcttgcaaagttaattaat
attttaaaacctgaatatgtaatacctgttcaagggctatatagatacttgcaagatgcg
caaaggtacattgttaaaaatgtaggatttaactctaaaaatgttttagtgttgcaaaat
ggtcaagttgcgcattttgacaatggtaaacttggctcatacaagagaaaaatcaaagaa
gttggcgatgttattgttgatggttttggtgttggcgatataaataccgaagtgcttaat
gaacgtgaagttttaggtcgtgaaggtgtggttttagttgctattagatataatccaatt
aagaaaaaaatagttggaaaagtgcaaattaatacagttggcgtaataagtaaagaagag
aagtcagaagcaaatgacttaattaaagcaacacttttaaatgtaattgagggcaaaaag
tttgaaagtttaagagagtttcaaaatgtttgcaggcaagcaattagaaaaagaatcttt
aaagtctttagcaaggagcctattgttgtttcagctgtaagcacacagtaa

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