Mycoplasmopsis agalactiae PG2: MAG6810
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Entry
MAG6810 CDS
T00536
Name
(GenBank) Conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
maa
Mycoplasmopsis agalactiae PG2
Pathway
maa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAG6810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maa03019
]
MAG6810
Messenger RNA biogenesis [BR:
maa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MAG6810
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RMMBL
RNase_J_b_CASP
RNase_J_C
Motif
Other DBs
NCBI-ProteinID:
CAL59381
UniProt:
A5IZC2
LinkDB
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Position
complement(795984..797654)
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AA seq
556 aa
AA seq
DB search
MNHINIFALGGLDENGKNCYILETFDEKGENKKIYVINSGAKVPINSSNKIDTLIPNFNY
LIKNKDAIQGVFVTDVKNDSFSALPWLLMKMPTVPVYTSKFNKVLIMERLSKYKLDLKKV
KINILDRPTKVGDIFVNPIELAGSMPGHIGLDFITPSGDYLFMFNFVEANLGIYGNLDFD
EMPKKFFAKRKIKALIVDSGNSNQNCRAADKIVLPRNVREAFFSARPDQRIIVGAYDEEM
YSISQILDFAYEAKRPVIAYGKTYGQVLSLIKSVVPDLRLPKVLDYKYANKVKNAVILVT
GTVERLHSRFARITDNNDVYLKLQENDTVIMIAPAINGLESLEAVVLDDIARVSPKVMEL
NNFEFFHHHPAREDLAKLINILKPEYVIPVQGLYRYLQDAQRYIVKNVGFNSKNVLVLQN
GQVAHFDNGKLGSYKRKIKEVGDVIVDGFGVGDINTEVLNEREVLGREGVVLVAIRYNPI
KKKIVGKVQINTVGVISKEEKSEANDLIKATLLNVIEGKKFESLREFQNVCRQAIRKRIF
KVFSKEPIVVSAVSTQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatattaatatatttgctcttggtggacttgatgaaaatggcaaaaattgctac
attttggaaacatttgatgaaaaaggcgaaaacaaaaaaatatatgtaattaactcaggt
gctaaagttcctattaattcaagcaataaaatcgacactttgattcctaatttcaactat
ttaattaaaaacaaggatgccatacaaggcgtttttgttactgatgttaaaaatgattca
tttagtgcacttccatgattattaatgaaaatgccaacagtgcctgtttatacatctaag
ttcaataaagtattaattatggaaagattgtctaagtataagttagacttgaaaaaagtt
aagattaatattttagacaggcctaccaaagttggcgacatttttgttaatccaattgaa
ttagcaggctcaatgccaggacacattggtcttgattttattactcctagtggtgattat
ttgtttatgttcaattttgttgaagcaaatttaggtatatatggaaacttagattttgat
gaaatgcctaaaaaattctttgcaaaaagaaaaattaaggcattaatagttgattcagga
aactcaaatcaaaattgtagagcagctgacaaaattgttttaccaagaaatgtaagagaa
gcattttttagtgcaagacctgatcaaagaatcattgttggtgcttatgatgaagaaatg
tattcgataagtcaaattttagattttgcatatgaagcaaaaagaccagtaatagcttat
ggaaaaacatatggacaagttttaagtttgattaagtcagtagttcctgatttgagattg
cctaaagttttagattataagtatgctaataaagtaaaaaatgcagttattttagttact
ggaactgtcgaaagattgcactcaagatttgcaagaattacggacaacaatgatgtttat
ttaaaacttcaagaaaatgacactgttataatgattgctcctgcaatcaatggattagag
tctttagaagctgtagtgcttgatgatattgctagagtcagtcctaaggttatggagctt
aataattttgaatttttccaccaccatccagctagagaagatcttgcaaagttaattaat
attttaaaacctgaatatgtaatacctgttcaagggctatatagatacttgcaagatgcg
caaaggtacattgttaaaaatgtaggatttaactctaaaaatgttttagtgttgcaaaat
ggtcaagttgcgcattttgacaatggtaaacttggctcatacaagagaaaaatcaaagaa
gttggcgatgttattgttgatggttttggtgttggcgatataaataccgaagtgcttaat
gaacgtgaagttttaggtcgtgaaggtgtggttttagttgctattagatataatccaatt
aagaaaaaaatagttggaaaagtgcaaattaatacagttggcgtaataagtaaagaagag
aagtcagaagcaaatgacttaattaaagcaacacttttaaatgtaattgagggcaaaaag
tttgaaagtttaagagagtttcaaaatgtttgcaggcaagcaattagaaaaagaatcttt
aaagtctttagcaaggagcctattgttgtttcagctgtaagcacacagtaa
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