Mycoplasmopsis agalactiae PG2: MAG7480
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Entry
MAG7480 CDS
T00536
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
maa
Mycoplasmopsis agalactiae PG2
Pathway
maa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MAG7480 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maa03400
]
MAG7480 (recD)
Enzymes [BR:
maa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MAG7480 (recD)
DNA repair and recombination proteins [BR:
maa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MAG7480 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
SH3_13
Viral_helicase1
UvrD_C_2
UvrD-helicase
AAA_11
PIF1
AAA_12
SLFN-g3_helicase
AAA_22
Helicase_RecD
NPHP3_N
AAA_16
RsgA_GTPase
cobW
PhoH
RNA_helicase
AAA_18
TraI_hel_assoc_N
AAA_24
NACHT
Motif
Other DBs
NCBI-ProteinID:
CAL59448
UniProt:
A5IZI9
LinkDB
All DBs
Position
complement(874988..877258)
Genome browser
AA seq
756 aa
AA seq
DB search
MFMSNESNSGAIRLKGKFLVVKWSGADNNIPRELWIFESSPERERFFIYTNKQEIKSSCF
YEIEIKLRASKRSKYQNSTYELLSFKIVSPDNDSDIEKMLVSNVAGLGVKGIQRIKSELG
LSSIKELFNDVESAQNVLKTAIYENLKAFINSFDQKDYDFFAENGLLKLYDKLRARFENN
DFVSRYKNNGDPYELYVDHWIDFKLVNLFAQCVNKNIEPYKIIRAFTYKILRTNFNNICT
MYYDDLPFYKSLWNWYEDYRRDNSDNSTLFEQSYIVSLLSLLLQKRDISDDLIIESLNVM
IQRGEVYFDSDSKRLSLNEVYEQELFVAKKLIKIRDSELKQQVNPLTSQKLAEEQKKAYA
SALNNPLSVITGYPGTGKSYLIAYIVETLLKDKHYKKKDIAVLTPTGRASTILAYKTGIE
ARTIHSFLKLSKPDEDDSFIESFEKENPIKVVVIDEFSMVSLPIMYELLKTCTSIERLIL
VGDRDQLPCIGKGNLLEDIINSKKLPTFVLKEIHRTDKIDIFEHFIAINDNKVPKIDTEN
VKFIEQNGILFLNNIVKIYEEKVNKYSIDNVIILLPSYLELGQPGINEVNKRLQEWNIKR
TGAKKNLSIHNNLTLFVGDRVIQTVNDYDKNVFNGEIGIVEEINTDSKNTFIIVGFGQGK
KVRYNRSEILENLSLAYAITVHKFQGSEASCVIFGILKNRVEHMFTKKFMYTAVSRAKEE
LLLLGSKDLYIQKIQSRNADLKHYTNLKSLIEKEAK
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgagtaatgaaagtaattcaggagccataaggctaaaagggaagtttttagtt
gtaaagtgaagcggagctgataataacattccaagagagctctgaatttttgaatcaagt
cctgagagagagcgttttttcatttacaccaataaacaagagataaagagctcatgtttt
tatgaaattgaaattaaattaagagcttcaaagcgctcaaaatatcaaaattcaacatat
gaattactaagctttaaaattgttagtcccgataatgatagcgacattgaaaaaatgcta
gtaagcaatgtggctgggctaggagttaaagggattcaaagaataaaaagtgagttaggg
ttatcaagtatcaaagagttatttaatgatgttgaatctgcccaaaatgtcttaaaaaca
gccatatacgaaaatttgaaggctttcataaacagctttgatcaaaaagattatgacttt
tttgctgaaaatggacttttgaaattgtatgacaaactgcgtgctagatttgagaacaat
gactttgttagtagatataaaaacaatggtgatccatatgaattgtatgtagatcattga
attgattttaagttagtaaacctttttgcacaatgtgtaaacaaaaacattgaaccttac
aaaataataagagcatttacttataagatattaagaacaaattttaataacatttgcaca
atgtattatgatgatttacctttttataaaagtttatgaaactgatatgaggattataga
agagataattcagataacagcacactttttgaacagtcttatattgtgtcattgttgtca
ctgttgcttcaaaaacgagacataagtgatgatttaattattgaatcgttaaatgtaatg
atccagcgaggagaagtttactttgatagtgattctaaaaggctttcattaaatgaagta
tacgagcaagaattgtttgttgctaaaaaactaatcaaaataagagatagtgagctaaag
caacaagttaatccacttacatctcaaaaattagcagaagaacaaaaaaaagcttatgca
agcgctttaaataatcctctctcagttataactggttatccaggaaccggaaaaagttat
ttaattgcttatattgttgaaactttattaaaggataagcattataagaaaaaagatatt
gcagtgcttactcctactggaagagcatcgaccatattagcctataaaacaggcatagaa
gccagaacaattcatagttttttaaagttatctaaacctgatgaagatgattcattcatt
gaatcttttgaaaaagagaaccctattaaagttgttgttattgatgagttttcaatggta
agtttgccaattatgtatgaattgttgaaaacatgtacaagcattgaaagacttatttta
gtcggggacagagatcaactaccttgcatcggtaagggcaatttgttagaagatattatt
aacagtaaaaagcttcctacttttgtattaaaagaaattcatagaactgacaaaattgac
atattcgagcattttatagccataaacgacaataaagttcctaaaattgatacagaaaat
gtaaagttcattgagcaaaacggaatattgtttttaaacaatattgttaaaatatatgaa
gaaaaagtcaacaagtattcaattgataatgtaataattttacttccttcatatttagag
ttagggcagcccggaattaatgaagttaataaaaggcttcaagaatgaaatataaaaaga
acgggcgctaaaaagaatttatcaattcacaacaatttaactttatttgttggtgataga
gttatacaaactgtaaatgattatgataaaaatgtttttaatggcgaaataggcattgtt
gaagaaataaatacagacagcaagaacacatttattattgttggttttggtcaaggtaaa
aaagttaggtataacagaagcgaaattttagagaacttatcactagcttatgctataact
gtgcataaattccaagggtcagaagctagctgcgttatttttggaattttgaaaaacaga
gttgagcatatgtttactaaaaaatttatgtatacggctgtttcaagggcaaaagaggaa
ttattgcttttaggttctaaggacttatatatacaaaaaattcaatctagaaatgctgat
ttaaagcactatactaatttaaaatcattaatagaaaaagaggcgaaataa
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