Methylobacter arcticus: ABXJ76_00070
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Entry
ABXJ76_00070 CDS
T11593
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
maac Methylobacter arcticus
Pathway
maac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABXJ76_00070 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maac03021
]
ABXJ76_00070 (rho)
03019 Messenger RNA biogenesis [BR:
maac03019
]
ABXJ76_00070 (rho)
Transcription machinery [BR:
maac03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ABXJ76_00070 (rho)
Messenger RNA biogenesis [BR:
maac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABXJ76_00070 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
S1CSD-TOTE-2
Spore_III_AA
AAA_25
Mor
AAA
Motif
Other DBs
NCBI-ProteinID:
XVL51724
LinkDB
All DBs
Position
12288..13544
Genome browser
AA seq
418 aa
AA seq
DB search
MNLTELKLKQISEVIEIAESLGLENVARSRKQDLIFAILKKQAKAGDDISGDGVLEILQD
GFGFLRTPGCSYLAGPDDIYVSPSQIRRFSLKTGDTISGKIRPPKDNERYFAMLKVDQIN
FEPPENTKNKITFSNLTPLFAKQRFVLEQGNGTSEDLTGRMIDLIAPIGKGQRGLIVSPP
KAGKTMILQSLAQAIAEQNPECYLIVLLIDERPEEVTEMERCVRGEVISSTFDEPATRHV
QVAEMVIEKARRLVEHKHDVVILLDSITRLARAYNTVVPSSGKILTGGVDANALEKPKRF
FGAARNIEEGGSLTIIATALVDTGSRMDEVIYEEFKGTGNMELHLDRKIAEKRIYPAINI
NRSGTRREEYLIDPDTLQKTWILRKILQPMDETAASEFLIGKLKDFKTNAEFFDSMKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaactgagttaaaactaaaacaaataagtgaagttattgaaatcgccgagtcc
cttgggcttgaaaatgtagccagatcgcgaaagcaggatttgattttcgctatcctgaaa
aaacaggcaaaagccggtgacgatatatcaggcgatggtgtgctggaaattttacaggat
ggttttggttttttacgtacgccgggctgctcctatttagcgggtccagacgatatttat
gtttcacccagtcaaatcaggcgattttctttaaagaccggcgatacgattagcggaaag
attagaccgcccaaagataacgaacgttattttgcgatgctcaaagttgaccagatcaat
tttgaacctccggaaaatactaaaaacaaaatcaccttctcaaatctgactcccttattt
gccaaacaaagattcgtccttgagcagggcaacggtaccagcgaagatttgaccgggcgg
atgatagatttaatagcccccatcggcaaaggccagcgcggattgatcgtatcgccgcct
aaagccggtaaaaccatgatcctgcaaagcctggctcaggcgattgcagaacaaaatcct
gaatgttatctgattgtgttgttgatcgacgaacgtcccgaagaagtcaccgaaatggag
cgctgcgttcgcggcgaagtcatttccagcacctttgatgagccggcaacccggcatgta
caggttgcagaaatggtgatcgaaaaggcgcgtcgattggtcgagcataaacacgatgta
gtcattttgttagactcgattacgcgtctggccagagcttataatactgttgtgccatcg
tcaggcaaaatattgaccggtggtgttgatgcaaatgcgctggaaaaaccgaaacggttc
ttcggggcggcgcgaaatattgaagagggcggcagcctgaccattattgccactgcgttg
gttgataccggatcgagaatggacgaggttatctatgaggaattcaagggtaccggcaac
atggagttgcatttggatcgcaagattgccgagaaaagaatttacccggcgattaatatc
aatcgttccggtacgcgccgcgaagagtatctgattgatcctgataccttgcaaaaaacc
tggatcttgcgcaaaattcttcagcccatggatgaaacggcggcttcagaatttttgatc
ggcaagcttaaagattttaaaacgaatgcagaattttttgattcgatgaagcggtag
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