Martelella sp. AD-3: AZF01_06615
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Entry
AZF01_06615 CDS
T04332
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
maad
Martelella sp. AD-3
Pathway
maad03030
DNA replication
maad03430
Mismatch repair
maad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
maad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AZF01_06615
03430 Mismatch repair
AZF01_06615
03440 Homologous recombination
AZF01_06615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maad03032
]
AZF01_06615
03400 DNA repair and recombination proteins [BR:
maad03400
]
AZF01_06615
Enzymes [BR:
maad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AZF01_06615
DNA replication proteins [BR:
maad03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AZF01_06615
DNA repair and recombination proteins [BR:
maad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AZF01_06615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
McdB_C
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
AMM84067
LinkDB
All DBs
Position
1421277..1424768
Genome browser
AA seq
1163 aa
AA seq
DB search
MADVIGHGGDDRSGGAAVRFVHLRTHSAYSLLEGALPLKKILKLALDDRQPAVAVTDTNN
LFGALEFSQKAIGEGLQPIIGCQLSIDMEDGGEGDRRGGSHLPAKLPAIVVLVANETGYA
NLMHLVSEAYLGGEAHDSIYIRKSWLEGRADGLIALTGGPGGPIDQALASGFEAKARERL
EALKTLFGDRLYVELQRQGAFDLQRERHVINLAYELELPLVATNEPFFPAREDFEAHDAL
MAVAHNAIVSDDRRFRLTPDHFMKTQAEMAELFSDLPEALDNTVEIARRCGFILQTRSPI
LPRFTGASDDPEEAERAEALELRRQAVEGLEARLSHVGLSEGHSRQDYVERLDYELGIIE
SMKFPGYFLIVADFIKWAKEHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLN
PERVSMPDFDIDFCQDRREEVIRYVQQKYGRAQVAQIITFGSLQARAALRDVGRVLEMPY
GQVDRISKLVPNNPANPVTLAKAIEDEPKFQEAAEEEPIVGRLLAIAQKIEGLYRHASTH
AAGIVIGDRPLSRLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKTAVDF
IARRDIKVDLSLVPLDDHDTYDMLARGETVGVFQVESAGMRKALIGMRPDRIEDLIALVA
LYRPGPMENIPVYNARKHGEEEIESVHPMIDHLLAETQGVIIYQEQVMQVAQVLSGYSLG
EADLLRRAMGKKIKEQMDKQRVRFVEGAVEKGVKKQRADEIFDLLAKFANYGFNKSHAAA
YAIVSYHTAFLKAHYPVEFLAASMTLDMANTEKLNDFRHDARRLGIEVVAPSIQTSHRHF
EPGEDRIYYALAAIKGVGDAAVDHIVAARGERPFVDLEDFCQRIDPKLVNRRVLESLICA
GAFDCFGHDRAALLAGLDRIIGLAQRTQEDRASGQADIFGSAGQVSKIVLPDYTPLSDSE
RLMREYQMLGFYQTAHPLDAYADILAKMRVQAFSAFQLSVKNGSDRGRLAGTVVAKQERK
TRTGNRMGIVTFSDATGQFEAVLFSEMLYQYRDLLEPGTSVVITVSAEMRPEGIGMRIQT
VQSLEEEAVRQQSAMRIFLRDDSPIASLARHLNENGEGLVSFVVIQDHGLREIEVELPGK
YRLSPEVASAMRAVAGVVDVELV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgtgatcggacacggcggcgatgaccggtcgggcggggcagcggttcgattc
gttcacctgagaacccactcggcctattcccttcttgagggagccttgccgctcaagaaa
atcctgaagcttgcccttgatgaccggcagccggcagtcgccgtcaccgacacgaacaat
ctgttcggcgcgctcgaattttcgcagaaggcgatcggggaggggctgcagccgattatc
ggctgtcagctgtcgatcgacatggaagacggcggcgagggcgatcggcgcggcgggtcc
cacctcccggcaaaattgccggcgatcgttgttctcgtggccaatgaaacgggctatgcg
aacctcatgcacctcgtcagcgaggcctatcttggcggcgaggcgcatgacagcatctat
atccggaagtcctggctggaaggccgggcggacggtctgatcgctctgaccggtgggccg
ggcggtccgatcgaccaagcgctcgcctcgggtttcgaggccaaggcgcgcgagcgtctg
gaagcgctcaagacgcttttcggcgaccggttgtatgtcgaattgcagcgtcagggtgct
tttgatctccagcgcgaacgccatgtgatcaatctggcctatgagcttgaacttccgctg
gtggcaaccaatgagccttttttcccggcgcgcgaggatttcgaggcgcatgacgcgctg
atggccgtcgcgcataatgccattgtctccgacgaccggcgttttaggctgacgccggac
cacttcatgaaaacgcaggcggaaatggcggaactgttttccgaccttcccgaggcgctc
gacaatacggtcgagatcgcacggcgctgcggcttcatcctgcagacgcgcagtccgatc
ctgccgcgcttcaccggcgcttccgacgatccggaggaggccgagcgggccgaggcgctc
gagttgcgtcgacaggccgtcgaggggctcgaggcgcggctctcccatgtggggctgagc
gaggggcacagtcgccaggattatgtcgagcggctcgactatgaactgggcatcatcgag
agcatgaagtttcccggctacttcctgatcgttgccgacttcatcaaatgggccaaggaa
catgatattcccgtcggtccgggccgcggctcgggcgcgggctcgcttgtcgcctatgcg
ttgacgattaccgatgtcgacccgctgcgcttctcgcttctgttcgaacgctttctcaac
cccgagcgcgtgtcgatgccggacttcgatatcgatttctgtcaggaccggcgcgaggag
gtgatccgctacgttcagcagaaatacggacgcgcccaggtggcgcagatcatcactttc
gggtcgctgcaggcgcgtgccgccctgcgcgatgtcggccgcgtactggaaatgccttac
gggcaggtcgaccggatcagcaagctcgtgcccaacaatccggccaatccggtcacgctt
gccaaggcgatcgaggacgagccgaaattccaggaggccgccgaagaagagccgatcgtc
gggcgtctgctggcgatcgcgcagaagatcgaggggctctaccggcatgcctcgacccat
gccgccgggatcgtgatcggcgaccggccgctttcgcgactggtgccgatgtatcgcgat
ccgcgctcggacatgccggtcacgcagttcaacatgaaatgggtggagcaggccggtctc
gtgaagttcgactttctcgggttgaagacgctgacggtgttgaagacggcggtcgacttc
atcgctcggcgcgacatcaaggtcgacctgtcgctggttccgctcgatgatcacgacacc
tatgacatgctggcccgcggcgagacagtcggcgtgttccaggtggaaagcgccggcatg
cgcaaggcgctgatcgggatgaggccggaccgcatcgaggacctgatcgcccttgtcgcg
ctttatcggccggggccgatggaaaacatccccgtctataatgcgcgcaagcacggcgag
gaggagatcgagtcggtgcatccgatgatcgatcatcttctcgccgagacccagggcgtt
atcatctaccaggaacaggtgatgcaggtggcgcaggtgctttcgggctattcgctcggt
gaggccgaccttctgcgccgcgcgatgggcaagaagatcaaggagcagatggacaagcag
cgcgtccgtttcgtcgagggcgcggtcgaaaagggcgtcaagaagcagcgcgcggacgag
atcttcgatcttctggcgaaattcgccaattacggcttcaacaagtcgcatgccgcggcc
tacgccatcgtctcttatcatactgcctttctgaaggcgcattatccggtggagttcctt
gccgcgtcgatgacgctcgacatggccaataccgaaaagctgaacgattttcggcacgac
gcccgaaggctcggcatcgaggtggtggcgccgtcgatccagacgagccaccggcatttc
gagccgggcgaggaccggatctactatgcgcttgccgccatcaagggcgtcggcgatgcg
gccgtcgatcatatcgtcgcggcgcgcggcgagaggccctttgtcgatcttgaggatttc
tgccagcgcattgaccccaagctcgtcaaccgccgggttctggagagcctgatctgcgcc
ggcgcgtttgattgtttcggccatgaccgcgcggcgcttctggccggactcgatcgcatc
atcggccttgcccagcgaacccaggaggatcgcgccagcggccaggccgatatcttcgga
agcgccggccaggtctccaagatcgtgctcccggactatacgccgctttccgactccgaa
cggctgatgcgcgagtaccagatgctcggcttctatcagacggcccatccgctcgatgcc
tatgccgatattctggcgaagatgcgcgttcaggctttctcggccttccagctttcggtg
aagaacggttcggaccgcggccggctcgcgggcaccgtggtggccaagcaggaacgcaag
acccggaccggcaaccgcatgggcatcgttaccttttcagatgccaccggccagttcgag
gcggtgctgttttcggagatgctctatcagtaccgtgatctgctggaacccggcacatcg
gtcgtcatcaccgtttccgccgaaatgcggccggaagggatcggcatgcgcatccagacg
gtccagtcgctcgaggaggaggcggtgcgccagcaaagcgcgatgcggatattcctgcgc
gacgattcgccgatcgcctcgctcgcgcgccacctgaatgagaatggcgagggcctggtg
tcgtttgtcgtcatccaggatcacggtcttcgcgagatcgaggtcgagttgccgggcaag
tatcgcctgtcgcccgaggtggcctcggccatgcgggccgtcgccggcgtcgtggacgtg
gaactggtctga
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