Martelella sp. AD-3: AZF01_09590
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Entry
AZF01_09590 CDS
T04332
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
maad
Martelella sp. AD-3
Pathway
maad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
maad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AZF01_09590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maad03400
]
AZF01_09590
DNA repair and recombination proteins [BR:
maad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AZF01_09590
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AZF01_09590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
DUF87
AAA_16
UB2H
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AMM84575
UniProt:
A0A127CIA5
LinkDB
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Position
complement(2059934..2062735)
Genome browser
AA seq
933 aa
AA seq
DB search
MANRPSKQNRNSGFEEAPQTSFEGKAGEGSMADWLAGLEAEAESQAVESQRSLASKAGKH
RKKASERKESAGEQSKAGDATAGRTSRGVSIGASSDPKTRAAAGLNPVSGVDVSLEDAKN
LAPGAVTATVDALSKLIESGNPLFKDGKIWTPHRPERPEKSEGGIPIRMETEYKPSGDQP
TAIRDLVGGLNDGERSQVLLGVTGSGKTFTMAKVIEETQRPAVILAPNKTLAAQLYSEFK
NFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHAATRAILERDDCII
IASVSCIYGIGSVETYTAMTFQMSVGDALDQRQLLADLVAQQYKRRDMDFQRGSFRVRGD
TIEIFPAHLEDAAWRISMFGDEIDQITEFDPLTGQKTGDLQSVKIYANSHYVTPRPTLNA
AIKAIKEELKGRLQELEKAGRLLEAQRLEQRTRFDIEMMEATGSCPGIENYSRYLTGRRP
GEPPPTLFEYIPDNALIFIDESHVTIPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLR
FEEWDAMRPDTIAVSATPGGWEMEQSGGVFAEQVIRPTGLIDPPVEVRPAKTQVDDVLSE
IRDVSARGYRTLVTVLTKRMAEDLTEYLHEQGIRVRYMHSDIDTLERIEIIRDLRLGAFD
VLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADQVT
GSMQRAMEETSRRREKQLVYNEEHGITPESVKARISDILDSVYEKDHVRADIGAKGGKGF
AKDGHLVGNNLQAHLEALEKQMRDAAADLDFETAARLRDEIKRLKAAELEGMDDKLEKAE
SRQAEAAPTSSGDDSGSYFARPSLDDMGPGTDTARPLFRKNTLDEMTVGRTEKPRGGDDK
PVKRGKIGAGSYEDPAEQKQRGRRRSKTGKPGK
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggctaacagacctagcaaacaaaacaggaactccggcttcgaggaagcgccgcagacg
tccttcgagggcaaagccggcgaaggttcgatggcggactggctcgccggactcgaggct
gaagccgagtcccaggccgtcgaatcacagcgatcgctcgcctccaaggcgggcaagcac
cgcaagaaagcctccgagcgcaaggaaagcgcgggagaacagagcaaagccggcgacgcg
accgccgggcgaacatcgcgcggcgtctcgatcggcgcgtcatccgacccgaagacgcgc
gcggccgccggcctcaatccggtctccggcgtcgacgtctcgctggaagacgcgaagaat
ctcgcgcctggcgcggttaccgcgacggtcgatgcgctctccaaattgatcgagagcggc
aatccgctgttcaaggacggcaagatctggaccccgcaccgcccggagcgtccggaaaaa
tccgagggcggcatcccgatccgcatggagaccgaatacaagccctccggcgaccagccg
acggcgatccgcgacctcgtcggcggtctgaacgacggcgagcgcagccaggtccttctc
ggcgtcaccggctcgggcaagaccttcaccatggccaaggtgatcgaggagacgcagcgc
ccggccgtcatcctggcgccgaacaagacgctcgccgcccagctctattccgagttcaag
aacttcttccccgacaacgcggtcgagtatttcgtctcctattacgattactaccaaccg
gaagcctacgtcccgcgctccgacacctatatcgagaaggaatcgtcgatcaacgagcag
atcgaccgcatgcgccatgcggcgacccgcgccattctcgagcgtgacgactgcatcatc
atcgcctcggtctcctgcatctacggtatcggttcggtcgagacctacaccgcgatgacc
ttccagatgtcggtcggcgacgcgctggaccagcggcaactgctcgccgacctggtggcc
cagcaatacaagcgccgcgacatggatttccagcgcggctccttccgcgtgcgcggcgat
acgatcgagatattccccgcccaccttgaggatgccgcctggcgcatttccatgttcggc
gacgagatcgaccagatcaccgagttcgatcctctgacggggcagaagacaggcgacctg
caatcggtcaagatctacgccaactcgcactacgtcacgccgcgcccgacgctgaatgcg
gccatcaaggcgatcaaggaagagttgaagggacgtctgcaggagcttgaaaaggcagga
cgacttctggaagcgcagcgtcttgaacagcgcacccgcttcgacatcgagatgatggag
gcgacaggctcctgtcccgggatcgagaactattcgcgctatctgaccggacgcaggccg
ggcgagccgccgccgaccctcttcgaatacatcccggacaatgctctgatcttcatcgac
gagagccacgtcaccattccgcagatcggcggcatgtatcggggcgacttccggcgcaag
gcgacgctcgccgaatatggcttccgcctaccctcctgcatggacaaccggccgctgcgg
tttgaggagtgggacgcgatgcggcccgatacgatcgccgtttcggccacgcccggcggc
tgggagatggaacagtccggaggcgttttcgccgagcaggtgatccgcccgaccgggttg
atcgacccgccggtcgaggtgcgcccggccaagacccaggtcgacgacgtgctgagcgag
attcgcgacgtctcggccaggggttaccgcacgctggtcacggtcctgaccaagcgcatg
gccgaggacctcaccgaatacctgcatgaacagggtattcgcgtgcgctacatgcattcc
gacatcgatacgctggagcgaatcgagatcattcgcgacctccggctcggcgctttcgac
gtgctggtcggcatcaaccttctgcgtgagggtctcgacattcccgaatgcggcttcgtc
gccatcctcgatgccgacaaggagggtttcctgcgttcggagacctcgctgatccagacc
atcggccgcgcggcgcgcaatgtcgacggcagggtgatcctctatgccgatcaggtgacc
ggttctatgcagcgcgccatggaggagaccagccgccgccgcgagaagcagctcgtctac
aatgaagagcacggcatcacgccggaatcggtcaaggcgcggatctccgacattctcgat
tcggtctacgagaaggaccatgtccgcgccgatatcggcgccaagggcggcaagggcttt
gccaaggacggacatcttgtcggcaacaatctgcaggcccatctggaagcgctggaaaag
cagatgcgcgacgccgccgccgacctcgatttcgaaaccgccgcacggctgcgcgacgag
atcaagcggctgaaggccgccgaactcgagggcatggacgacaagctggaaaaggccgaa
tcgcgccaggccgaggcagcgccgacatcgtcgggcgacgacagcggctcttatttcgcc
cgcccctcgctcgacgacatgggtccgggtaccgacacggcgcggccgcttttccgcaag
aacacgctggacgagatgacggtggggcgcaccgaaaagccgcgcggcggcgatgacaag
ccggtcaagcgcggcaagatcggcgccggctcctatgaggatcccgccgagcagaaacag
cgcggccggcgcaggagcaagaccggcaaacccggcaaatag
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