Martelella sp. AD-3: AZF01_13565
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Entry
AZF01_13565 CDS
T04332
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
maad
Martelella sp. AD-3
Pathway
maad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AZF01_13565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maad03021
]
AZF01_13565
03400 DNA repair and recombination proteins [BR:
maad03400
]
AZF01_13565
Enzymes [BR:
maad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AZF01_13565
Transcription machinery [BR:
maad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AZF01_13565
DNA repair and recombination proteins [BR:
maad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AZF01_13565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AMM85260
LinkDB
All DBs
Position
complement(2904736..2908944)
Genome browser
AA seq
1402 aa
AA seq
DB search
MNQEVMNLFNPQAPAQVFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCS
RIFGPMKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRISTLLDMTLKDVERVLYFENYIVTEPGLTDLKENQLLSEEEYMLAVDEFGEDQFSA
NIGAEAIYEMLAGMDLEKIAGDLRAELADTTSDLKQKKLMKRLKIVENFLESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDMVLGLYYLSIMNENEPGEGMAFADMGELHHALE
NKVVTLHSKIKGRFKTVDEDGNEVSKIYETTPGRMIIGELLPKNSNVPFETCNQEMTKKN
ISKMIDTVYRHCGQKDTVIFCDRIMSLGFGHACRAGISFGKDDMVIPDAKHEIVAETEAL
VKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVTEEMMARIKAVEFDPETGRQKQMNSIY
MMSHSGARGSVNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSSHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVNTADCGTDKGLTMTAIVDAGQVVASIGQRVLGRA
ALVDIEDPVTGELIVEAGRQINEADVIKIEASGIQSVQIRSALTCEVQTGVCQVCYGRDL
ARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHLGGTANVVDQSFLESSYEGTVRIKNRN
VLRNSDGVLVAMGRNMAIQILDQRDQERSSQKVAYGSKLFVDDGDTVRRGQRLAEWDPYT
RPMMTEVSGTVDFEDLVEGLSVTETTDEATGFTKRSVIDWRSTPRGSDLKPSIVIKDANG
EIMKLPRGGEARLPLSVDAILSVEPGQKVSQGDVLARSPLESAKTKDITGGLPRVAELFE
ARRPKDHAVIAEIDGTIRFGRDYKNKRRIQIEPAEDGVEPVEYLIPKSKPFHLQDGDYIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEVIVRQMLQKIE
ITASGDSGQITGDIIEAIAFDNMNEELVAQGKRPAEGEPVLLGITKASLQTPSFFSAASF
QETTKVLTEAAIAGKVDTLQGLKENIIVGRLIPAGTGRAMGQVRRIATQRDDLIIDARRK
ASGADEATPMLSSMNEEPQPGE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatcttttcaatccgcaggcgccggcgcaggtcttcgattcg
atccggatctcgatcgccagcccggaaaagatcctttcctggtcttatggcgaaatcaag
aagccggaaaccatcaactaccgcacgttcaagcccgagcgtgacggcctgttctgctcg
cgcatcttcggcccgatgaaggactatgagtgcctgtgcggcaagtacaagcgcatgaaa
tacaagggcatcatctgcgaaaagtgcggcgtcgaagtcacgctgtcgcgcgtgcgccgc
gagcgtatgggccatatcgagctcgccgctccggtcgcccatatctggttcctgaagtcg
ctgccgagccgtatctcgacccttctcgacatgacgctgaaggatgtcgagcgcgttctc
tatttcgagaactacatcgtcaccgagccgggcctgacggatctgaaggaaaatcagctc
ctgtcggaagaggaatacatgctggccgtcgacgagttcggcgaggaccagttctcggcc
aatatcggcgcggaagccatctatgagatgcttgccggcatggatctcgagaagatcgcg
ggcgacctgcgcgccgagctggccgacaccacgtcggacctgaagcagaagaagctgatg
aagcgtctcaagatcgtcgagaactttcttgagtcgggcaaccgtcccgaatggatgatc
atgaaggtcgttccggtgatcccgccggacctgcgcccgctcgtcccgctcgacggcggc
cgtttcgcgacgtcggacctcaacgatctctatcgccgcgtcatcaaccgcaacaaccgt
ctgaagcggctcatcgagctgcgcgcgccgggcatcatcatccgcaacgagaagcgcatg
cttcaggaatcggtcgatgcgctgttcgacaacggccgccgcggccgcgtcatcaccggc
gccaacaagcgtccgctgaagtcgatctccgacatgctgaagggcaagcagggccgcttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgttcggtcatcgtgaccggc
ccggaactgaagctgcatcagtgcggcctgccgaagaagatggcgctggaactgttcaag
cccttcatctacgcccgtctcgacgccaaggggtattcctcgaccgtcaagcaggcgaag
aagctggttgaaaaggaacgtccggaagtctgggatatcctcgacgaggtgatccgcgag
catccggtgctcctgaaccgcgcgccgacgctgcaccgcctgggcatccaggcgttcgag
ccgacgctggtcgaaggcaaggccatccagctgcatccgctcgtctgcacggccttcaac
gccgacttcgacggcgaccagatggccgttcacgtgccgctgtcgctcgaagcccagctt
gaagcccgcgtgctgatgatgtcgaccaacaacatcctgcatccggccaatggtcagccg
atcatcgtgccgtcgcaggacatggttctcggcctctactacctctcgatcatgaacgag
aacgagcccggcgaaggcatggcctttgccgacatgggcgagctccaccatgcgctcgaa
aacaaggtcgtcacgctgcattccaagatcaagggccgtttcaagacggtcgacgaggac
ggcaacgaggtctcgaagatctatgagaccacgcccggccgcatgatcatcggcgagctt
ctgccgaagaactcgaacgtgccgttcgagacctgcaaccaggaaatgaccaagaagaac
atctccaagatgatcgacacggtctaccgccattgcggccagaaggacacggtgatcttc
tgcgaccggatcatgtcgctcggcttcggccatgcctgccgcgccggcatttccttcggc
aaggacgacatggtgatcccggacgccaagcacgaaatcgtcgccgagaccgaagcgctg
gtgaaggaatacgagcagcagtacaatgacggtctcatcacccagggcgagaagtacaac
aaggttgtcgacgcctggggcaaggcgaccgagaaggtcacggaagagatgatggcccgc
atcaaggccgtcgagttcgatcccgagaccggtcgccagaagcagatgaactcgatctac
atgatgagccattccggcgcccgcggttcggtgaaccagatgcgtcagctcggcggcatg
cgcggcctgatggcgaagccctccggcgagatcatcgaaacgccgatcatctcgaacttc
aaggaaggcctgaccgtgaacgagtacttcaactcgtcgcacggcgcccgtaagggtctg
gccgataccgccctgaagacggcgaactcgggttacctgacccgtcgtctcgtcgacgtg
gcacaggactgcatcgtcaacacggccgattgcggaaccgacaagggcctgaccatgacc
gccatcgtcgatgccggccaggtggttgcctccatcggccagcgcgtgctcggccgtgcg
gcgcttgtcgacatcgaggatccggtcaccggcgagctgatcgtcgaggccggccgtcag
atcaacgaggccgacgtcatcaagatcgaggcttcgggcatccagtcggtccagatccgt
tcggctctgacctgcgaggttcagacgggcgtctgccaggtctgctacggtcgcgacctt
gcgcgcggtacgccggtgaatatcggcgaggccgtcggcgtcatcgccgcccagtcgatc
ggcgagcccggcacgcagctgaccatgcgtaccttccaccttggcggtacggcgaacgtg
gttgaccagtcgttcctggaatcctcctatgagggcacggtgcggatcaagaaccgcaac
gttctgcggaactccgacggcgttctggtggcaatgggccgcaacatggcgatccagatc
ctcgaccagcgcgatcaggagcggtcctcgcaaaaggtcgcctatggttcgaaactgttc
gtcgatgacggcgacacggtgcgtcgcggtcagcgtcttgccgagtgggacccctatacc
cgaccgatgatgacggaagtctccggcacggtcgacttcgaagacctcgtcgaaggtctg
tccgtcaccgaaacgacggatgaggcgaccggcttcaccaagcgctcggtcatcgactgg
cgttcgacgccgcgcggttccgatctgaagccgtccatcgtcatcaaggatgccaatggc
gagatcatgaagctgccgcgcggcggcgaggctcgcctgccgctgtccgtcgacgcgatc
ctttcggtcgagcccggccagaaggtcagccagggtgacgtgcttgcccgttcgccgctg
gaaagcgccaagaccaaggacattaccggtggtctgccgcgcgttgcggaactgttcgaa
gcccgccgtccgaaggaccatgccgtgatcgccgagatcgacggcacgatccgcttcggc
cgcgactacaagaacaagcgccgcatccagatcgagcctgcggaagacggcgtcgagccg
gtggaatacctcattccgaagtcgaagccgttccatctgcaggacggcgactacatcgag
aagggcgactacatcctcgacggcaacccggccccgcatgacatccttgccatcaagggc
gtcgaggcgctggcctcctatctcgtcaacgagatccaggaagtctatcgcctgcagggc
gtggtcatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaagatcgag
atcaccgcttctggcgacagtggccagatcaccggcgatatcatcgaggcgatcgccttt
gacaatatgaacgaggaacttgtggcacagggcaagcggcctgccgaaggcgagccggtt
ctgctcggcatcaccaaggcctcgctgcagacgccgtccttcttctcggccgcgtccttc
caggagaccaccaaggttctcacggaagcggcgattgccggcaaggtcgatacgctccag
ggcctgaaggaaaacatcatcgtcggccgtctgatcccagccggtacgggacgcgcgatg
ggccaggttcgccgcatcgcgacccagcgcgacgacctcatcatcgacgcccgccgcaag
gcttccggcgccgacgaggcaacgccgatgctctcctccatgaacgaagagccgcagccg
ggcgaataa
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integrated database retrieval system
