Martelella sp. AD-3: AZF01_13940
Help
Entry
AZF01_13940 CDS
T04332
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
maad
Martelella sp. AD-3
Pathway
maad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
maad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AZF01_13940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maad03400
]
AZF01_13940
Enzymes [BR:
maad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AZF01_13940
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AZF01_13940
DNA repair and recombination proteins [BR:
maad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AZF01_13940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AMM85320
UniProt:
A0A127CKY4
LinkDB
All DBs
Position
2992279..2993169
Genome browser
AA seq
296 aa
AA seq
DB search
MPELPEVETVRRGLAPAMEGRRIEKLVLNRADLRFPFPENLVETAANRTIVALGRRAKYL
LIDLDDGTTIIAHLGMSGSWRVEEEDDAHLPGRFHAPRSVNALHDHVIIELSGAPARRIV
YNDPRRFGFIKLARKAMLEADPTFAGLGPEPTGNSLDADFLAARFAGKTQAVKSALLDQR
NIAGLGNIYVCEALWRARLSPFRAAGRLVTPRGRPKEGLKRLVPAIRAVIAEAIEAGGST
LRDHRRTDGTLGYFQHSFSVYDRTGAPCPHEDCGGTVARAVQAGRSTFYCPACQKG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaagtcgaaaccgtccgccgcggactggcgcccgccatggagggt
cgccggatcgagaagctcgttctcaaccgcgccgaccttcgctttccctttcccgaaaac
cttgtcgagactgcggcgaacaggaccattgtcgccctggggcgacgggcgaaatacctg
ctgatcgacctcgatgacggcaccacaatcatcgcccatctcggcatgtcgggttcctgg
cgcgtcgaggaggaggacgatgcccacctgccgggccggtttcatgcgccgcgcagcgtc
aatgcgctgcatgaccacgtgatcatcgaactgagcggcgcgccggcacggcgcattgtc
tacaacgatccgcgccgcttcggcttcatcaagcttgcgcggaaggcaatgctggaagct
gatccgacctttgccggcctcgggccggagccgaccggcaacagtctcgatgccgatttc
ctggccgcgcgctttgccggcaagacgcaagccgtcaaatccgccctccttgaccagcgc
aatatcgccggcctcggcaatatctatgtctgcgaggcgctctggcgcgcccggctttcg
ccctttcgcgccgcgggccgcctcgtcacgccgaggggaaggccgaaggaaggactgaag
aggcttgttccggcaatccgcgccgtcattgccgaggcgatcgaggccgggggctcgacg
ctgcgcgaccaccgcaggacggacggcacgctcggctatttccagcactccttttccgtc
tacgaccgcaccggcgcaccctgcccgcatgaagactgcggcggcacggtggcccgcgcc
gtgcaggccggccgctcgaccttctattgtccggcctgccagaagggataa
DBGET
integrated database retrieval system
