Martelella sp. AD-3: AZF01_18160
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Entry
AZF01_18160 CDS
T04332
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
maad
Martelella sp. AD-3
Brite
KEGG Orthology (KO) [BR:
maad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maad03400
]
AZF01_18160
Enzymes [BR:
maad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AZF01_18160
DNA repair and recombination proteins [BR:
maad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AZF01_18160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMM86036
UniProt:
A0A127CMI5
LinkDB
All DBs
Position
complement(3945793..3948999)
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AA seq
1068 aa
AA seq
DB search
MTMAPVNADQGLVIVPAGAGAGKTHRIKTQLSDWVKRGIVRPERILAVTFTEAAAGELRE
RIRAGLLADGLVAEAMAVERAYVSTIHGLGLRLLTEHALAAGASPQPRHLGDAERDLLIR
QALAHAKALDPIKAAPERFGYAPNFVKGETVEDSLRARVLSMIDLLRGLGDKGRDAGLIA
PALTQLDTVYGPVLDDPIAATTALQTAVQVMIAAFPEGGMAGITAKTNVEKLEKNLALFK
RVDRAPDLLDRDWQVWNDLRSLFISNRSSKTPAGYDDLATAIMAAADVLPCHPGPLADAK
LHLSCLIACAQEVMAAYETRKKALGLIDFADMITGAEHLLRTDLAVRQAVLDEIDCVIID
EFQDTNPVQFALLWQLGQHAPRTLLVGDVKQSIMGFQGADPRLSIALAAANPDATQPLDR
NWRSTPAIMQFVNAMGAGLFGQGYNPLAPTRDAVAGPAIEVLNATQGRRSQKYSQPPEHI
AERIARILTDTETITDRHTKAARPARPSDIALLVCRHTTAARYAEELRARGVPVRIAEDG
WAKSPVIVAARAALAFAANPADIHAGLLLRTLGPDPLPLQEALSAQMEGRLVDDPVLMRL
AALSNLLARLPVGAALDLVLDAAGLRLWAERQPDAAQSRADLLRLEAEAGEFEAAHRDLK
SASGFHGETAKIFLGWLDARGSERDFDRHPDPSANSDEAVEIVTWHASKGREWPITVVAE
FDYGIEERAGATATRFDALDRIDDMAVVLGSASLIHTPGFAAPEATRRFIEDRRADFETN
AKNLLYVALTRARDRMVLEWPGFLKDREEDAPEATNLFHILSDTCAPQIGAGSLRINGVD
CPALITQLPEEAGFTEYAGGAAASALRFGAAAPLPVTPLTPWRLQPSQTRSAGVPPVSRR
INIGAPWPKALNDAYRGTALHLALRTYLTRPDLAPALALATGLDDATLALVAERATALKA
WLADQGYTDLRAEIPVLGHTPEGAEIPGALDLLAIGPAGAMLIDHKSGGGGDGFGPYWPQ
LSSYAGLLAGLYPQHPLQGVAVFWVDHGWLELADEGASAGAFAQARVN
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggcccccgtcaatgcagatcaaggtctggtcatcgttcccgcgggtgccggc
gcgggcaagacccaccgcatcaagacccagctgtccgattgggtgaaacgcggcattgtc
cggcccgaacgtatccttgccgtcacctttaccgaggccgcggctggcgagttgcgcgaa
aggatccgtgccggccttctggccgatggactggtcgccgaggcgatggcggtcgagcgc
gcctatgtctcgaccatacatggactgggcctgcggcttttgaccgaacatgctctggcg
gctggcgcctcgccgcagccgcgccatctgggcgatgccgagcgggatctgctgatccgt
caggcactggcacatgccaaggcgctggacccgatcaaggccgcgcccgagcggttcggt
tacgccccgaacttcgtgaagggcgagacggtcgaagacagtttgcgcgcccgggtgcta
tcgatgatcgacctcttgcgcggccttggggacaaggggcgtgacgctggcctgatcgct
ccggcactgacgcagctggatacggtttacgggccggttctggatgaccctatcgccgcg
accaccgcgttgcagacggccgtgcaggtcatgatcgcagcctttcccgagggaggcatg
gccgggatcaccgccaaaaccaatgtcgagaagctggagaaaaacctcgcgcttttcaaa
cgtgttgatcgcgcgcccgatcttctggatcgggattggcaggtctggaacgatctgcgc
agcctgttcatctctaaccgctccagcaagacgcctgcgggatatgacgaccttgccacg
gcgatcatggcggcggcggatgtgctgccctgccatcccggcccgctggccgatgctaag
ctgcacctgtcctgcctgatcgcctgcgcgcaagaggtgatggcggcctatgagacccgc
aagaaggcgctcggcctgatcgactttgctgatatgatcaccggggctgagcacctgctc
cgcaccgacctcgccgtgcggcaagcggtgctggacgagatcgactgcgtcatcatcgac
gaattccaggataccaaccctgtgcaattcgcgcttttgtggcagttgggccagcacgcg
ccgcgtacactgctggtgggcgatgtcaaacagtcgatcatggggtttcagggcgccgat
ccgcgcctatccatagcgctggcggcggcaaaccccgatgcgacccagcctttggaccgc
aactggcgctcgaccccagccatcatgcaattcgtcaatgcgatgggggctggcctcttt
gggcagggctataacccgctggcgccgacccgcgatgcggtcgcaggtcccgcgatcgag
gttctgaacgctacgcagggacggcgctcacaaaagtattcgcagcccccagaacacatc
gccgagcgcatcgcccgtatcctgactgatactgagaccatcaccgaccgccacacgaag
gccgcccggccggcgcggccttcggatatcgcgctcttggtctgccgccacaccaccgcc
gcccgctatgccgaggaattgcgcgcgcgcggcgttccggtgcggatcgccgaggatggc
tgggcgaaaagcccggtgatcgttgccgcccgcgccgcgctggcctttgccgccaatccg
gcggatatccatgccgggctgctcttgcgcacgcttggcccggacccgctgcccttgcag
gaggcgctatccgcccaaatggaagggcggttggtggatgacccggtgctgatgcggctc
gccgctctgtcgaaccttttggcccgcctgccggtgggtgcggcccttgatctggtgttg
gatgccgccggcctgcgcctctgggcggaacgtcagcctgacgccgcccaatcccgtgcc
gatcttttgcggctagaggctgaggcgggtgagttcgaagccgcgcatcgcgatctcaaa
tccgcctcggggttccacggcgagactgccaagatatttctcggctggctcgacgcccgt
gggagcgagcgcgatttcgaccgtcatcccgatccttccgccaacagcgacgaggcggtg
gagatcgtcacctggcacgcctccaaagggcgggaatggccgatcactgtcgtcgccgag
ttcgactatggcattgaggaacgtgcgggggccactgcgacccgtttcgatgccctggac
cgcatcgacgatatggcggtggtgctggggtccgcgagcctaatccacacgcccggcttt
gccgcgcccgaggcgacccgccgtttcatcgaagaccgccgcgccgattttgaaaccaat
gcgaaaaaccttctctatgtcgccctgacccgtgcccgtgaccggatggtgctggaatgg
ccgggttttctgaaggaccgcgaagaagacgcgcccgaggctacgaacctgtttcatatc
ctgtccgatacttgcgcaccgcagatcggggcgggcagcctgcgcatcaatggcgtggat
tgcccggcgctgatcacgcaactgcctgaagaggcgggatttaccgagtacgcaggcggt
gcggcagcctcagcgctgcgattcggtgccgctgcgccgttgcccgtgacaccgctgacg
ccctggcggctgcagccctcgcaaacccgtagtgcgggggtgccgcccgtgtcccgccgt
atcaacatcggagcaccctggccaaaggcactgaacgatgcctaccgcggcacagcactg
catctggcgctgcgcacatacctgacccggcccgatctggccccggctttggctctcgcg
accgggcttgacgacgccactcttgcgctagtggccgagcgcgccacggcgctgaaagcc
tggcttgccgatcagggctatacggacctgcgcgccgagattccggtgcttggccacacg
cccgagggtgcagagatccccggtgctctcgaccttctcgccatcggcccggcaggcgcg
atgctgatcgaccataaatccggcggcggcggtgacgggtttggcccctattggccacag
ctttccagctatgccggactgttggccggactatacccgcagcatccgctgcagggcgtg
gcggtgttctgggtcgatcacggttggctggaactggcagatgagggcgcgtcagcggga
gctttcgcacaggccagagttaactga
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