Mycobacteroides abscessus ATCC 19977: MAB_0399c
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Entry
MAB_0399c CDS
T00657
Name
(GenBank) Exodeoxyribonuclease V, beta subunit (RecB)
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mab
Mycobacteroides abscessus ATCC 19977
Pathway
mab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MAB_0399c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mab03400
]
MAB_0399c
Enzymes [BR:
mab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MAB_0399c
DNA repair and recombination proteins [BR:
mab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MAB_0399c
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
PDDEXK_1
UvrD_C_2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CAM60498
UniProt:
B1MFU8
LinkDB
All DBs
Position
complement(395526..398771)
Genome browser
AA seq
1081 aa
AA seq
DB search
MKRFDLLGPLPADRSTTVLEASAGTGKTFALAGLVTRYVAEGVATLDQMLLITFGRAASQ
ELRDRVRGQIVDALRAFADPSTARTDLTQYLISAEQDTRQRRLRDALAGFDAATIATTHQ
FCHIVLKSLGVAGDSDSGVTLVENLDELVCEIVNDRYLTHFGKDRDAPPLSYPAALRLAR
EVVRNPATQLRPLQPEADSYAFAALGFARDVLEQLEIRKRRRGILGFDDLLTRLADALNA
TDSPARVRMHQRWPIVMVDEFQDTDPVQWQVLERAFSGHSTLVLIGDPKQAIYAFRGGDI
ETYLRAAATAGDKQTLGTNWRSDAALVDRLQVVLRGAQLGGPDIVVHDVQAHHQGHRLAG
APHNDPFRLRVVSRNRDGIKVIPIADLRRSIGRDLAADIGALLSSGATFDGRPVRARDIA
VIVEAHKDARACHTALTEAGIPAVYTGDTDVFSSDAAQDWLYLLEAFDQPHRPGLVRAAA
ATVFFGETAETLAVGGESLTDEIAGTLRTWAARARERGVAAVFEAAQLAGMGKRVLSWRG
GERMMTDLAHLTELLQETAHRNGFGPAALRDWLRTQCSEGGAEAERNRRLDSDAAAVQIM
TVWVSKGLQFPVVYLPFSFNRYVPEREYVLYHEDGLRCLHIGGREDPDYSMADLAGRTEA
ARDASRLAYVALTRAQSQVVAWWAPSFDEPNGGLSRLLRGRAPGNPSVPDKCSPAKISDA
DVLKRLRAWEAQGGPVVEDALVTGFVPAATSSPSDNLAVRVFDRPIDTAWRRTSYSGLLR
AAEESGVSSEPEIAELDDEVDEIPLRSMPAGADVPSPMAQLPAGAAFGSLVHAVLETTDP
LAPDLVAELQTQIIRHRERWPVEIPAAELAAALEPMHDTPLGPLLPGVTLRQIGLRDRLC
ELDFEFPLAGGDAAADSFARLADVGMLLREHLAADDPLGVYASRLTGPGLGGQSLRGYLS
GSVDAVLRVGSRYVVVDYKTNWLGTGDAPLTAADYSRPRMVEAMLHSDYPLQALLYSVVL
HRFLSWRLPGYRPEEHLGGAVYLFVRGMCGATTPVVEGHPAGVFSWQPPSALVVALSELL
S
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtttcgacctgctggggccgctgcccgcggatcgctccaccacggtattggag
gccagcgcgggtaccggcaagaccttcgcattggcgggtctggtcacccggtacgtcgcc
gagggcgtcgcgacgctggaccagatgctgctcatcaccttcgggcgtgcggccagccag
gagctccgggatcgagtgcgcggccagatcgtggacgccctgcgggctttcgcggatccg
tcgacggcacgcacggatctgacgcagtatctgatctcggccgagcaggacacacgccaa
cggcggctgcgggatgcgctcgccggcttcgacgcggcgaccatcgccaccacacaccag
ttctgccacatcgtgctgaagtccctgggtgtggcgggcgacagcgattccggtgtgacg
ctcgtggaaaacctggacgagctggtgtgcgagatcgtgaacgaccggtacctgacacat
ttcggcaaggaccgtgacgccccgccgctgagctatccggcggcattgcgcctggccagg
gaggtggtgcgcaacccggcgacgcagctgcgcccgctgcagcccgaggccgattcgtat
gcgtttgcggccctgggcttcgcccgcgatgtactggagcagctggaaatccgtaagcgc
cgccgcggcatcctcggcttcgatgatctgttgacccgtctggccgacgcactgaacgca
acggactctcccgcacgggtgcggatgcaccagcggtggcccatcgtcatggtggatgag
tttcaggacaccgatccggtgcagtggcaggtactggaacgggccttctcgggccactcc
acgttggttctgatcggtgaccccaagcaggccatctacgcgttccgcggcggggacatc
gagacgtatctgcgcgcggcagccacggctggcgacaagcagacgctgggtaccaactgg
cgtagcgacgccgcgctggtcgatcggctgcaggtggtgctgcggggggcgcagctcggc
ggcccggacatcgtggttcacgacgtgcaggcacaccatcaagggcatcggctggcgggc
gctccccacaacgatccgtttcggctacgggtggtgtcgcgaaatcgagacggtatcaag
gtgattcccattgccgatctgcggcgcagcatcggtagagatctggccgccgatatcggg
gcattgttgtccagtggcgccaccttcgacggccgcccggtgcgggcccgagatatcgcg
gtgattgtcgaggcgcacaaggatgctcgcgcgtgccataccgcgctgaccgaggcaggc
attcccgccgtctataccggtgacaccgacgtgttcagttccgatgcggcacaggactgg
ttgtacctgttggaggcattcgatcagccgcaccgccccggtctggtgcgcgcggcggca
gcgaccgtgttcttcggcgagacggcggaaacccttgccgtgggcggtgaatcgctgacc
gacgagatagcgggcaccctgcgcacctgggcggcacgagcccgcgagcgcggggttgcg
gcggtgttcgaggccgcacaactggccgggatgggtaagcgggtgctgtcgtggcgcggc
ggcgagcgcatgatgaccgatctcgcccacctgacggaactgttgcaggagacggcacac
cgcaatggcttcgggccggccgcgctgcgcgactggttacgcacccagtgctcggagggc
ggggctgaggccgaacgcaaccggcgcctggacagcgacgccgcggcagtgcagatcatg
acggtgtgggtgagcaaggggttgcaattccccgtcgtatatctgcctttctccttcaat
cggtatgtaccggaacgggagtacgtgctgtaccacgaggatgggctgcgttgcctgcac
atcggcggccgggaggacccggactattcgatggccgatttagcgggccgcaccgaggcg
gcccgtgatgccagccggctcgcctatgtggcgctgacacgggcacagtcccaggtggtc
gcgtggtgggcaccgtccttcgatgaacccaacggcgggctgtcccggctgttgcgagga
cgtgcacccgggaatccgtcggtgcccgacaagtgttctccggccaagatttccgacgcg
gacgtgctcaagcggctgcgggcctgggaagcccagggcggcccggtggtcgaggatgcg
ctggtgaccggattcgttcctgctgccacatcgtcaccttccgacaatctcgcggtccgg
gtgttcgatcggccgatcgataccgcctggcggcgcacgtcgtattcggggctgctgcgg
gccgccgaagaatcgggcgtatcgagcgaaccggagatcgccgagctggacgacgaggtg
gatgagattcccttgcggtcaatgccggccggtgccgatgtgccctcgccgatggcgcag
ctgcccgccggcgcggcctttggttcgttggtgcacgcagtgctggagaccacggatccg
ttggcgccggacctggtggcggaactacagacacagatcatccggcaccgggagcgttgg
ccggtcgaaattccggcggcagagttggccgccgcactggagccgatgcacgacactccg
ctgggcccgctgctgccgggtgtgacgctgcgtcagataggactgcgggatcggttgtgc
gagctagatttcgagttcccgttggccggcggagatgcggccgcggactcgttcgcgcgg
ctggcggatgtgggcatgctgctgagagagcatctcgcggccgatgatccgctgggggtg
tacgcgtcacgtctcaccggtcccgggctgggtgggcagagcctgcgcggatatctgtcc
ggttccgtagatgcggtgctgcgggttggctctcggtacgtggtggtcgactacaagacc
aactggctggggaccggcgacgctccgctgacggccgctgattattcgcggccacggatg
gtcgaggccatgctgcattcggactatccgctgcaggcgctgctgtacagcgttgtactg
catcggttcctgtcctggcggctgccgggataccggccagaagaacacctgggcggcgcc
gtgtatctgtttgtgcgcggaatgtgtggcgcgactaccccggtggtagaggggcatccg
gccggggtgttcagctggcagccgccctcggcgctggtggtcgcgctgtcggagctgctg
tcatga
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