Mycobacteroides abscessus ATCC 19977: MAB_0400c
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Entry
MAB_0400c CDS
T00657
Name
(GenBank) Exodeoxyribonuclease V, gamma subunit (RecC)
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mab
Mycobacteroides abscessus ATCC 19977
Pathway
mab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MAB_0400c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mab03400
]
MAB_0400c
Enzymes [BR:
mab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MAB_0400c
DNA repair and recombination proteins [BR:
mab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MAB_0400c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CAM60499
UniProt:
B1MFU9
LinkDB
All DBs
Position
complement(398768..402001)
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AA seq
1077 aa
AA seq
DB search
MALHLRRAERTDMLADGLARLLAVPAPDPFAEELVLVPAKGIERWLSQRLSDRLGVCAGV
RFRSPRSLIAEITGTVDNDPWSPDALVWPLLTVIDENLHQSWAVPLASHLGAFEAGEERE
LRQGRRYAVARRLAGLFASYARQRPELLVSWLDGDPAEPDLAWQPPLWRALVARVDAVPP
HVRHDRVRARLREAPSDLPPRISLFGHTRLPVTDIELLDALATHHDLYLWLPHPSDALWQ
TLASDHGPVPRREDIAHRSVRHPLLATLGRDVRELQRALPEPTSDEYLSGTTFSDSLLGW
LQSDLAADEVRPQGRALAAHDHTVQVHSCHGPARQIDVLREVLLGLLADDPTLEPRDILV
MCPDIETYAPLISARFGLGESVPGAHPAHQLRVRLADRALVQTNPLLTVAGQILSLASGR
ATASEVLNLAESSPVRMRFGFTDDDLDAITAWVREANIRWGFDPEHRAPYGVDFLHNTWR
FGIDRVLAGVALSEDAHAWLGATLPLDDVSSNRVELAGRFAEFVSQLHTTVTALSGTRPL
AEWLTILSTGIDALATDSEDWPRAQMLREFAEIQDAAVPVSLRLSDIRALLDRHLAGRPT
RANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALARDPMTGERDIRS
EDRQLLLDAIGAATETLVLTYTGANEYSGQARPPAVPLAELLDTLDITTSQPVRDRIHIT
HPLQPFDIRNVTPGSVIPGHPFTFDSTALIAARAAAGARAERPPFICGPLPALDVTDVAL
TDLAAFFNHPIKGFFRALDYTLPWDVDGVSDDMPVEIDALEEWTVGDRLLADMLRGMTPA
DAQQAEWRRGTLPPGQLGWRRVSELRERCAALAAETRGYQTDDSRAFDIDIDLGDGRRLA
GTVSPVFGERLVSVTYSRLDAKHLLQSWIPLVALSAHDHQRDWSAVCIGRARRGPQPLVR
SLGRPMDPLGVLRGLVAIYDAGRREPLPLPLKTSYAWAQARRDRDDPELQAGYRWRSGNF
PGEDADPAVERAFGQGVWLRHLMQPLRPGEETEGETNRLGAYSARLWLPLLRAERGA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcacctgcgccgggccgagcggaccgacatgctcgccgacgggctcgcccgg
ctgctggccgtacccgctccggatccctttgccgaggagttggtgctggtaccggcgaag
ggcatcgagcggtggctcagccagcggttatccgacaggctgggggtgtgtgcgggcgtg
cgatttcgcagcccacgctcactgatcgccgagatcaccggaaccgtcgacaacgacccg
tggtcacccgatgcgctggtgtggccgctgctgacggtgatcgacgagaacctgcaccag
tcctgggccgtcccgctcgcctcgcacctcggggctttcgaggccggcgaagaacgtgag
ctgcgccagggccgccgctacgcggtggcacggcgccttgcggggctgttcgcgtcctat
gcgcgccagcgtccggagctattggtctcctggctcgacggagacccggcggaaccggat
ctggcgtggcagccgccgttgtggcgcgcgctggtggcgcgggtcgacgcggttcccccg
catgttcgacacgaccgggtccgtgctcgcttgcgggaggcgccatcggatctgccgccg
cgcatatccctgttcgggcatacgcggctcccggtcaccgatatcgaactgctcgatgcc
ctggcgacgcatcacgacctgtacttgtggctaccgcaccccagcgatgcgctatggcag
acgttggcgagcgaccacggcccggtcccgcggcgcgaggacatcgcgcatcgttcggtg
cgtcatccgctactggccacgctgggacgcgatgtccgtgaattgcagcgcgccctgccc
gaaccaacgtcagatgaatatctcagtggcacaacattttcagactcactgttgggttgg
ctgcagtccgacctggcggccgacgaggtgcgtccgcagggccgggcgctcgcggcgcac
gatcatacggtgcaggtgcattcctgccacggcccggcacgtcagatcgatgtgctgcgc
gaggtgctgctgggcctgcttgccgacgaccccacactggagccgcgcgacatcctcgtc
atgtgccccgacatcgaaacctatgcgccgttgatatcggcccgttttggtctcggcgag
tctgtaccgggcgcgcacccggcccatcagttacgggtccggctcgccgatcgtgctctg
gtgcaaaccaatccgctactgacggtggccgggcagatactgagtctggccagtgggcgc
gccaccgccagcgaggtcttgaacctcgccgagtcgtcgccggtgcggatgcgttttggc
ttcaccgacgacgatctggacgcgatcaccgcgtgggtgcgcgaggcgaacatccgatgg
ggtttcgacccggaacatcgcgcgccgtacggcgtcgacttcctgcacaacacctggcgt
ttcggtatcgatcgggtacttgccggggtggcactgtccgaggacgcgcatgcctggctg
ggtgccacgctgccgctcgacgatgtgagcagcaatcgggtcgagctggccggccgcttc
gcggagttcgtctctcagctccacaccacggtgaccgcgttgagcggcacccggcccttg
gccgagtggctgaccattctgtcgacgggtatcgatgctctcgccacggattcggaagat
tggccccgcgcccagatgttacgcgagttcgccgagatccaggatgcggccgtgccggtc
tctttgcggctcagcgatattcgcgcactcctggatcgccacctggcgggccgccccacg
cgcgccaactttcgcaccggcaccctcacggtctgcaccatggtgcccatgcggtcggtc
ccgcatcgggtcgtctgtctcgtcgggctcgacgacggcgtgttcccgcggctcggcgcc
gtcgacggagacgacgccctggctcgcgacccgatgaccggtgaacgcgatatccgttcc
gaagatcgacagttgcttctggacgcgatcggtgccgctaccgaaaccctggtactcacc
tataccggagccaacgagtactcgggacaggcgcgtccccccgccgtaccgctggccgag
ttgctggacacgttggacatcaccacgtcgcagccggtccgtgatcggatccacatcaca
cacccgttgcagccgtttgatattcgcaatgtgacgcccggcagcgtgattcccgggcat
ccgttcacctttgatagcaccgcgctgatcgcggcccgcgccgccgcgggagcacgggct
gagcggccgccgttcatctgcggcccactgcccgccctcgatgtcaccgacgtggcattg
accgatctcgctgccttcttcaatcatcccatcaagggcttcttccgcgccctggactac
accctgccgtgggatgtggacggggtatccgacgacatgccggtcgagatcgacgccctc
gaagagtggacggtgggcgatcgcctactggccgacatgctgcgcggtatgacaccggcc
gatgcacagcaggccgaatggcgccgtggcactttgcctcccggacagctcggctggcgg
cgggtctccgagttgcgagagcgctgcgcggcgctggccgcggagaccaggggctaccaa
accgatgacagccgagcctttgacatcgatatcgatctcggtgacgggcgccgcctcgcc
ggcaccgtgtccccggtgttcggtgagcggctggtgtcggtcacctattcgcggctcgac
gccaagcatctgctgcaatcgtggattccgttggtggcgttgagcgcccacgatcatcag
cgggactggtcggccgtatgcatcggccgcgcccgccgaggtccgcaaccgctggtacgc
agcctcggacgccccatggatccactgggcgtattgcgtggcctagtggccatctacgac
gcgggccgccgggagccgctgcccttaccgctgaagacctcctacgcgtgggcgcaggct
cgccgcgatcgtgatgaccccgagctgcaggccggataccgctggcgttccggcaacttt
ccgggcgaagacgcggaccctgccgtcgagcgcgccttcggccagggggtctggttgcgg
catctgatgcagccgctgcggcccggggaagagaccgagggggaaacgaaccgcctcggt
gcgtattccgcgcggttatggttgccgctgctacgggcggagcggggcgcatga
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integrated database retrieval system
