Mycobacteroides abscessus ATCC 19977: MAB_1054
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Entry
MAB_1054 CDS
T00657
Name
(GenBank) Putative ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mab
Mycobacteroides abscessus ATCC 19977
Pathway
mab03420
Nucleotide excision repair
mab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MAB_1054
03430 Mismatch repair
MAB_1054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mab03400
]
MAB_1054
Enzymes [BR:
mab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MAB_1054
DNA repair and recombination proteins [BR:
mab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MAB_1054
MMR (mismatch excision repair)
Other MMR factors
MAB_1054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAM61144
UniProt:
B1MJI8
LinkDB
All DBs
Position
1061713..1064136
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AA seq
807 aa
AA seq
DB search
MANLSEPALFDMPSDSSASSDALLDGLNPQQRAAVAHQGAPLLIVAGAGSGKTAVLTRRI
AYLLAARDVSPGQILAITFTNKAAAEMRERVGRIVANRVQSMWVSTFHSSCVRILRNQAS
LLPGLNSNFSIYDSDDSRRLLQMIGRDMGLDIKRYSPRLLATAISNLKNELISPEQAVAN
LTAGGQDGELRGDLPQIVADVYGEYQRRLRAANALDFDDLIGETVAVLQQFPQIAQFYRR
KFRHILVDEYQDTNHAQYVLVRELVGAHVDRTVDPDGPEPAELCVVGDADQSIYAFRGAT
IRNIEEFERDYPNAKTILLEQNYRSTQNILSAANSVIAKNANRREKRLWTDSGEGELIVG
YVADNEHDEASFIAREIDGLFDRSDANYGDIAVFYRTNNNSRSLEEIFIRTGIPYKVVGG
VRFYERKEIRDIVAYLRVLTNPGDAVSLRRILNTPRRGIGDRAEACVAVHAETNGIGFGE
ALADAAAGKVAMLNSRSEKAIAAFMDMLDQIRVTLRTDDPGALPDIGDVVEAVLNHTGYR
YELENSSDPQELARLDNLNELVSVAHEFSADAANAQAAGEDVPGDDEDVGAPPGSLEAFL
ERVSLVADADELPESSAGVVTMMTLHTAKGLEFPVVFVTGWEDGMFPHMRALGDPVELAE
ERRLAYVGITRARQRLYLSRAKVRSSWGQPMMNPESRFLQEIPQELIDWRRTDPLPGRIA
TGAGGYGGGGYGSGGSRAGGGSLGAPSKKRTKPLMVLEAGDRVSHDKYGLGRVVEVTGVG
ESATSLIDFGSEGRVKLMHNFAPVQKL
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctttccgaaccagcactttttgacatgcccagcgactcgagtgcctccagc
gacgcgttgctcgacggcctgaacccgcagcagcgggctgccgtcgcccaccagggcgca
ccgctgctcattgtcgccggtgccggctcgggcaagaccgcggtgctgacccgtcgcatc
gcgtacctgctggccgcgcgggacgtcagccccggtcagatcctggcgatcaccttcacc
aacaaggcggcggccgagatgcgcgagcgcgttgggcggatcgtggcgaatcgggtgcag
tccatgtgggtgtcgacgttccactccagctgcgtgcgcatcctgcgtaaccaggcctcg
ctgctgcccgggctcaactccaatttctcgatatacgactcggacgattcacggcggctg
ctgcagatgatcggtcgcgatatgggcctggacatcaagcgctattcgccacggctgctc
gccaccgcgatctccaatctgaagaacgagctcatctctcccgaacaggcggtggccaac
ctcaccgccggcggccaggatggggagctgcgcggggatcttccgcagatcgtggccgac
gtgtacggcgagtaccagcgccggctgcgcgccgccaacgccttggacttcgacgatctg
atcggcgagaccgtggccgtgctgcagcagttcccgcagatcgcgcagttctatcgccgc
aagttccggcacatcctggttgacgagtaccaggacaccaaccacgcccagtacgtgttg
gtccgcgagctggtgggagctcatgtcgaccgcactgtggacccggatggtccggagccg
gccgagctgtgcgtggtgggtgacgccgaccagtccatctacgcgttccgcggcgcgacc
atccgcaatatcgaagaattcgagcgcgactatccgaacgcgaaaaccattctgctggag
caaaactatcggtccacgcagaacatattgagtgcggcgaactcggtcatcgccaaaaat
gcgaaccgccgggagaagcggttatggaccgattccggcgagggagagctgatcgtcggc
tatgtcgcggacaacgaacacgacgaggcgtccttcatcgcccgcgagatcgacgggctc
ttcgatcgcagcgatgccaactatggtgacatcgcggtgttttaccgcaccaacaacaat
tcccggtcgctggaagagatcttcatccgtaccggtattccgtacaaagttgttggggga
gtgaggttttacgaacgcaaggaaattcgcgacatcgtcgcctacctgcgggtgctgacc
aacccgggcgatgcggtgagcctgcggcggatcctcaacacccctcgccggggtatcggc
gaccgggccgaggcctgtgtcgcggtacacgccgagaccaatggcatcggattcggggaa
gcgctggccgacgccgccgcgggcaaggtggcgatgctgaactctcgttccgagaaggca
attgcggccttcatggatatgctcgaccagatccgtgtcaccctgcgtaccgatgatccg
ggagcgctgcccgatatcggcgacgtggtagaggccgtactgaaccacaccggatatcgc
tacgaactggagaacagcagcgatccgcaggagctggcacgtcttgacaacctcaatgaa
ttggtcagcgtcgcacatgaattcagtgcggacgcggccaatgcgcaggccgccggggaa
gacgtgccgggtgacgatgaggatgtcggtgcccctccgggcagcctcgaggcattcctg
gagcgggtatccctggtcgccgatgcggacgagctgcccgagtccagcgccggcgtcgtc
accatgatgaccctgcacaccgccaaggggctggagttcccggtggtgttcgtgaccggc
tgggaagacggcatgttcccgcatatgcgggcactgggtgacccggtggagctcgccgag
gaacggcggctggcctatgtcgggatcacccgggctcgccagcgtctctatctgagccgg
gccaaagttcgttcgtcgtgggggcagcccatgatgaatccggaatcacgcttcctgcaa
gagattccgcaagaacttatcgactggcggcgcaccgatccgctgcctgggcggatcgcg
acgggcgccggcggttacggcggtggagggtacggatccggcggatcgcgtgcgggcggc
ggctcgctgggcgctccctccaaaaaacgcaccaagccgctgatggtgctggaggccggg
gaccgggtgagccacgacaagtacggattgggtcgcgtcgtggaggtgaccggtgtcggc
gagagcgccacttcgctcatcgacttcggcagtgagggccgcgtgaagttgatgcacaac
ttcgcacccgtgcagaagctctag
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