Mycobacteroides abscessus ATCC 19977: MAB_1971c
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Entry
MAB_1971c CDS
T00657
Name
(GenBank) Probable DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mab
Mycobacteroides abscessus ATCC 19977
Pathway
mab03030
DNA replication
mab03430
Mismatch repair
mab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MAB_1971c
03430 Mismatch repair
MAB_1971c
03440 Homologous recombination
MAB_1971c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mab03032
]
MAB_1971c
03400 DNA repair and recombination proteins [BR:
mab03400
]
MAB_1971c
Enzymes [BR:
mab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MAB_1971c
DNA replication proteins [BR:
mab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MAB_1971c
DNA repair and recombination proteins [BR:
mab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MAB_1971c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
SpoIIE
DEDDh_C
EAD7
RNase_H_2
DUF7071
Motif
Other DBs
NCBI-ProteinID:
CAM62053
UniProt:
B1MP02
LinkDB
All DBs
Position
complement(1969085..1970887)
Genome browser
AA seq
600 aa
AA seq
DB search
MTRRDALHASGPSQLTFDEVGTLRDTTFVVVDLETTGGSAENDAITEIGAVKVRGGEVLG
ELATLVDPQRSLPPQIVRLTGITSAMLVDAPPIAQVLPAFLEFARGAVLVAHNAGFDIGF
LKAAARQCGIDWPQPAVLCTVRLARRVLSRDEAPRVSLGALAQLLGASTTPNHRALDDAR
ATVDVLHALISRVGNQGVGTMDELRRYRTQVPSALRGKRRLADAMPYAPGVYLFRGPSGE
VLYVGTAVNLRRRVQQYFTGADPRGRMREMVTIATAVDHVICAHPLEAAVRELRLLGAHA
PPYNRKSRFPHRWWWVVLTEEPFPRFSVVRTTNGRPTLGPFRARGDATTAALVLARFTGV
RTCTNRIGAGGRHGSACDGQSYPHDTASPCPAAAGVDATVYRDGLAPMLAVLDGTHGQPL
QAMCDRVAELGAQRRYETAARQRDATTALIEVLARQHRLHALARIEELIAARPDGEGGWQ
IAVVRHGQLAGAAVARRGVPPMPVVAAASASAQVVLPTPEPFGGAAPEETGLITRWLAEP
GVRIVSSTDGYAEATGCAASLRDWAAAARSARMAAALHQDDWGMAELTRVAPTARSRVAG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggcgtgatgctctgcacgcaagcggcccatcgcagctgaccttcgacgaggtg
ggcacgctgcgcgacaccacctttgtggtggtggacctggagaccaccggcggcagcgcg
gaaaacgacgcgatcaccgagatcggcgccgtgaaggtgcgtggtggcgaggtactcggg
gaactggccaccctggtcgatccccagcgatcgctaccgccgcagatcgtgcgcctcacc
ggcatcacctcggcgatgctggtcgacgcaccgccgatcgcacaggtactgccggctttt
ctcgaattcgcccgtggtgcggtactggtcgctcacaatgccggcttcgatatcgggttc
ctcaaggcggcggcacggcaatgtggaatcgactggccacagcccgccgttctgtgcacg
gtccggctggcccgccgggtgctctcccgcgatgaggccccgcgcgtcagcctgggtgcg
ctggcgcagctgctcggcgcgtccaccacacccaaccaccgggctctcgacgatgcccgg
gccaccgttgatgtcctccacgcgctgatctcccgggtcggcaaccagggcgtcggcacc
atggacgagctgcggcgctatcgcacccaggtgcccagcgccctgcgcggcaagcgccgc
ctggccgacgcaatgccttatgccccaggcgtttacctattccgtggaccatcgggcgag
gtgttgtacgtcggcaccgccgtcaatctgcgccgacgggtacagcagtacttcaccggg
gcagatccgcgcggccggatgcgtgagatggtcaccatcgcgaccgcggtggaccatgtc
atctgcgcgcatccactggaggcggcggtgcgcgagctgcggttgttgggtgcgcacgca
cccccgtacaaccgcaaatcccggttcccgcaccgctggtggtgggtggtgctcaccgag
gagccgttcccccgattctccgtcgtccgcactactaacgggcggccgacgctcggcccg
tttcgcgcgcgcggcgacgcgacaaccgccgcactggtccttgcccggttcaccggtgta
cgcacctgcaccaaccgcatcggagcaggcggcagacacggctccgcttgtgacggccag
tcgtatccacacgacactgcctcgccctgccccgctgctgccggggtggacgcgaccgtc
taccgggacgggctcgcccccatgctcgccgtcctggacggcacacacggacaaccgctg
caggccatgtgcgacagggttgccgagttgggtgcccagcggcgctatgaaaccgctgcg
cggcaacgcgatgcgaccacggcactcatcgaggtgctggcccgccagcatcgtctgcat
gccctcgcacgcatcgaagagctgattgccgcccgccctgatggcgagggcggatggcag
atcgcggtggtccggcacggacagcttgccggggccgcggtggcccgacggggtgtgccg
ccgatgccggtggtggctgcggcctccgcgtccgcacaggtggtactgcccacccccgaa
ccgttcggcggtgccgcgcccgaggagaccgggctgatcacccgctggctggccgaaccc
ggagtccgcatcgtgtcctcgacggatggctatgccgaggcgaccggatgtgccgcatcg
ctgcgggattgggccgcggcggcacgcagtgcgcgcatggcggccgcccttcaccaggac
gactggggaatggccgagctgactagggtcgcgcctactgcccggtcccgagtcgctggc
tga
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