Mycobacteroides abscessus ATCC 19977: MAB_2696c
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Entry
MAB_2696c CDS
T00657
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mab
Mycobacteroides abscessus ATCC 19977
Pathway
mab03030
DNA replication
mab03430
Mismatch repair
mab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MAB_2696c
03430 Mismatch repair
MAB_2696c
03440 Homologous recombination
MAB_2696c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mab03032
]
MAB_2696c
03400 DNA repair and recombination proteins [BR:
mab03400
]
MAB_2696c
Enzymes [BR:
mab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MAB_2696c
DNA replication proteins [BR:
mab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MAB_2696c
DNA repair and recombination proteins [BR:
mab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MAB_2696c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
CAM62776
UniProt:
B1MC05
LinkDB
All DBs
Position
complement(2739214..2742771)
Genome browser
AA seq
1185 aa
AA seq
DB search
MSSSNSSFVHLHNHTEYSMLDGAAKIKPMLAEVERLGMSAVGMTDHGNMYGASEFYNVAA
ATGVKPIIGIEAYIAPASRFDTKRVFWGDPGQKSDDVSGSGSYTHMTMVAENATGLRNLF
KLSSLASFEGQLGKWARMDADLIAEHASGIIATTGCPSGEVQTRLRLGQESEALAAAAKW
QDIFGKDNFFLELMDHGLSIERRVREGLLEVGKKLGIPPLATNDCHYVTKDHAHNHEALL
CVQTGKTLSDPTRFKFDGDGYYLKPASEMRDLWDDAVPGACDNTLLIAERVQSYEDVWNF
KDRMPIFPVPEGEDQDSWLRKEVDRGLERRFEGVPGGVPDEYFTRAHYELDVIKQKGFPA
YFLVVGDLVSHAKEVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSA
PDIDIDFDDRRRGEMVRYATEKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIAD
RITKALPPPIMAKDIPVWGITNPEHERYKEAAEVRTLIDTDPDVRNIYQTALGLEGLIRN
AGVHACAVIMSSEPLTDAIPLWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGD
ALDNIKANRGIDLDLDHLPLDDPATYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDI
VAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILAETFGLIVYQEQIMF
IAQKVASYSMGKADALRKAMGKKKLEVLEAEYKGFYEGMTNNGFSEKAVKALWDTILPFA
GYAFNKSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVL
PPDVNESVHNFASVGEDIRYGLGGVRNVGANVVQSLIATREEKGAFTDFSDYLHKIDIAA
CNKKVTESLVKAGAFDSLGHPRKGLFLVQSDAVDSVLGTKKAEAMGQFDLFGGGGEDSVP
ASDIFAIKVPDDEWEEKHKLALEREMLGLYVSGHPLNGVAHLLSRQTDTQIPAILDGEVA
NDAVVKVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVLFFPQAYSVYGADIADDAVVL
VNAKVAIRDDRVSLIANDLVVPDFSQAADDRPVAVTMPTRQCTIDKVTALKQVLTRHPGT
NQVHLRLISGERVTTLELDQSLRVTPSSALMGDLKALLGPGCLGG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcctcgaattcttcgttcgtgcacctgcacaaccacaccgagtactcgatgctc
gacggtgcagcgaagatcaagccgatgctcgccgaggtcgaacggctgggcatgtctgct
gtcggcatgaccgaccacggaaacatgtacggcgcgagcgagttttacaacgtcgccgcg
gccaccggagtcaaaccgatcatcggtatcgaggcctacatcgcccctgcgtcgcggttc
gacaccaaacgtgttttctggggcgatcccggacagaagtccgatgacgtctcgggctcg
ggctcgtatacccacatgaccatggttgccgagaatgccaccgggctgcgcaacctgttc
aagctgtcgtcattggcctcgttcgaggggcagctgggcaagtgggcgcgcatggacgcc
gacctcatcgccgagcacgccagcggcatcatcgccaccaccggatgtccatcgggtgag
gtgcagacccgcctgcggctggggcaggagagcgaggcgcttgccgccgcggccaaatgg
caggacatcttcggcaaggacaatttcttcctggagctgatggaccacgggctgtccatc
gaacggcgggtgcgtgagggcctactggaggtcggcaagaagctgggcatcccgccgctg
gcgaccaacgactgccactacgtcaccaaggatcacgcgcacaaccacgaggcactgctg
tgtgtgcagaccgggaagacgctctcggaccccacccgcttcaaattcgacggcgacggc
tattacctcaaacccgcgtccgagatgcgggacctctgggatgacgccgttcccggtgct
tgcgacaacacgctgttgatcgccgaacgggtgcagtcctatgaagacgtctggaacttc
aaggaccggatgccgatcttcccggtgccggagggggaagatcaagactcctggctgcgt
aaggaagtggaccgcggactggagcgccgcttcgagggagtcccggggggagtgcccgac
gagtacttcacccgtgctcactacgagctggacgtcatcaagcaaaagggtttccccgca
tactttctcgtcgtcggtgacctcgtctcccacgcgaaagaggtcggcatcagggtcggc
cctgggcgtggttcggcggcaggttcacttgtcgcctacgcgctcggcatcaccaatatc
gacccgataccgcacggcctgctgttcgagcgattcctcaacccggaacgtccgtcggcg
ccggatatcgatatcgacttcgacgaccgccgccgcggtgagatggtccgctacgccacc
gagaaatggggcagcgaccgggtcgcacaggtcatcaccttcggcaccatcaagaccaag
gccgcattgaaggactcggcacggatccactacggccagccgggtttcgcgatcgccgac
cgcatcaccaaggcacttccgccgccgatcatggccaaggacatcccggtatggggcatc
accaaccccgagcacgagcggtacaaggaggccgccgaggtgcgcaccctgatcgatacc
gatccggatgtgcgcaacatctaccagacagcgcttggtctggagggcctgatccgcaac
gccggtgtgcacgcctgcgcggtcatcatgagctcggagcctctgaccgacgccatcccg
ctgtggaagcgcgcccaagacggcgccatcatcaccggctgggactatccgtcgtgtgag
gccatcggcctgctgaaaatggacttcctgggcctgcgcaacctcacggtcatcggcgac
gccctggacaacatcaaggccaaccgcggtatcgatctggacctggaccatctgccgctc
gatgacccggcgacctacgaattactttctcgcggcgacactctgggcgtcttccagctc
gatggcgggccgatgcgtgatctgctgcgccgtatgcagcccaccgggttcaacgacatc
gtcgccgtgctggcgctataccgccccggaccgatgggcatgaacgcgcacaacgactac
gccgaccgtaagaacgggcgccagccgatcaaaccgattcatccggagctggaggaaccg
ctcaaggacatcctggccgagacgttcggcctgatcgtctaccaagagcagatcatgttc
atcgcccagaaggttgcctcctactcgatgggtaaggccgatgcgctgcgtaaggccatg
ggtaagaagaagctcgaagtcctcgaggccgagtacaagggcttctacgagggcatgacc
aataacggtttctcggagaaggccgtgaaggctttgtgggacaccattctcccgttcgcc
gggtacgcgttcaacaaatcgcatgccgccgggtacgggctggtgtccttctggacggcg
tatctcaaggcgaactatccggccgaatacatggccggtttgctcacttctgtcggcgac
gacaaggacaaggcggccgtttacctcgctgactgccgtcgtctcggtatcaccgtgttg
ccgccggatgtcaatgagtccgtacataacttcgcgtcggtgggtgaggacattcggtac
ggactcggcggtgtgcgcaacgtcggcgccaacgtggtgcagtccctcatcgcgactcgc
gaggaaaagggagcgttcaccgacttctccgattacctgcacaagatcgatatcgcggcc
tgcaataagaaggtcacggaatctctggtgaaggcgggggcattcgactcgctagggcat
ccgcgcaaggggcttttccttgtgcagtccgacgcggtcgactcggtgctcggcaccaag
aaggccgaagccatggggcagttcgatctcttcggtggcggcggggaagacagcgtcccg
gcctccgatatttttgcgatcaaggttcccgacgacgagtgggaagaaaagcacaagctg
gccctggaacgagagatgctggggctgtatgtgtccggacatccgctcaacggtgtggcg
cacctactcagcagacaaaccgatacccagatccccgcgatcctcgatggcgaagtcgcc
aacgatgccgtagtcaaggtcggcggcatcttggcctcggtgaaccgccgtgtcaacaag
aatgggatgccgtgggcctcggcgcagctggaggatctcacgggtggcattgaggtgctg
ttcttcccccaggcctactcggtgtacggcgcagacatcgccgatgatgccgtggtgctc
gtcaacgcgaaggtcgcgatccgggatgaccgggtctcgctgatcgccaatgacctcgtg
gtgccggacttctctcaggcggccgacgatcggccggtcgcggtgacgatgccgacgcgg
cagtgcaccatcgacaaggtgacggcgctcaaacaggtgcttacccggcacccgggcacc
aaccaggtgcatctgcggttgatcagcggggagcgcgtcaccacgctggagctcgatcag
tcgcttcgggtgactccttcgtccgccctgatgggagatctcaaggcactgctcggtccg
ggctgtctggggggctag
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