Mycobacteroides abscessus ATCC 19977: MAB_3116c
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Entry
MAB_3116c CDS
T00657
Name
(GenBank) tRNA pseudouridine synthase B (TruB)
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mab
Mycobacteroides abscessus ATCC 19977
Brite
KEGG Orthology (KO) [BR:
mab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mab03016
]
MAB_3116c
Enzymes [BR:
mab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MAB_3116c
Transfer RNA biogenesis [BR:
mab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MAB_3116c
Prokaryotic type
MAB_3116c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAM63193
UniProt:
B1MD72
LinkDB
All DBs
Position
complement(3158360..3159256)
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AA seq
298 aa
AA seq
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MTDPLSRAGLVIVDKPAGMTSHDVVSRCRRIFSTRKVGHAGTLDPMATGVLVIGIERATK
IMGLLTLTTKSYAATIRFGQSTSTDDAEGEVLQTISASHLTEVDIEAAVAGLRGDIAQVP
SSVSAIKVDGQRAYKLAREGQSVELAARPVRISRFDVLAVRGSGEDLIDVDVEIDCSSGT
YIRALARDAGAALGVGGHLTALRRTRVGDFGLDRARTLEELADGATLTLDLDSACRQGFP
RRDLDAAEVDAVRNGRPLAPAGIEGTYAAVDADDRVIALLADKGSRTTSVVVLRPANL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatccgctgagccgggcgggcctggtgatcgttgacaagcccgccggaatgacg
agtcatgacgtggtgtcgcgttgtcgcagaatattttccacccgtaaggtggggcatgcc
gggaccctcgacccgatggctaccggagtactggtcattgggatcgagcgggccaccaag
atcatgggcctactcacgttgaccaccaagtcgtacgcggcgactatccgattcggtcag
agcaccagcaccgatgatgccgaaggggaggtgctgcaaacgatttcggcatcgcacctc
accgaggtggatatcgaggccgccgtggccggactgcgtggagatatcgcgcaggtgccg
tcctcggtgagtgcgatcaaggtcgacggacagcgcgcgtacaagctggcacgcgagggg
cagtcggtcgagctggccgcgcgtccggtgcgtatctctcgcttcgacgtgttggcggtg
cgaggctcgggtgaggacctgatcgatgtggacgtggaaatcgactgcagctcggggacc
tatattcgtgcgctcgcccgggatgcgggggccgcgctcggtgtgggcggacacctgacg
gcactgcggcgcaccagggttggtgatttcgggctggatcgagcccgcacgctcgaggag
ctggccgatggcgcgacgctaaccctggacctggattccgcgtgccggcaaggctttccc
cggcgtgacctggacgccgccgaggtggatgcggtgcgtaacggtcggccactggcgcct
gcggggatcgaaggcacctacgcggcggtggatgccgatgatcgcgtcatcgcgctgctg
gcggacaagggatcacgcaccacatcggtcgtggtgttgcggcccgcgaatttgtag
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