Mycobacteroides abscessus ATCC 19977: MAB_3515c
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Entry
MAB_3515c CDS
T00657
Name
(GenBank) Probable ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mab
Mycobacteroides abscessus ATCC 19977
Pathway
mab03420
Nucleotide excision repair
mab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MAB_3515c
03430 Mismatch repair
MAB_3515c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mab03400
]
MAB_3515c
Enzymes [BR:
mab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MAB_3515c
DNA repair and recombination proteins [BR:
mab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MAB_3515c
MMR (mismatch excision repair)
Other MMR factors
MAB_3515c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAM63591
UniProt:
B1MEY5
LinkDB
All DBs
Position
complement(3557288..3560524)
Genome browser
AA seq
1078 aa
AA seq
DB search
MNAYSPAELSRVLGLFEPTDEQAAVIGAPPGPMVVIAGAGAGKTETMAARVVWLVANGYA
TPGQVLGLTFTRKAAAQLLRRVRSRLARLAGSGILAPVAADEPDPVIATYHAYAGTLLRE
HGLLLPMEPNARLLTETQLWQLAFRLVCDFDGDLDTEKTPGAVTAQVLALAGQLSEHLVN
TTDLLSSHDELERLILTLPPGPRQREGGPSAWLLRLIETQRERTQLMAIVEQLIALMRTR
GVLDFGAQMALSARLAADHPIVGQTQRERYRVVLLDEYQDTGHAQRILLSSLFGRGVDPD
LALTAVGDPIQSIYGWRGASATNLPRFTTDFPLPDGSPAPTRELRTSWRNPPEALHLANS
VSEEARRRSVAVRPLLPRPDAASGRIACALLGDIAAEREWVATQLAAVYEQAHREGNRPP
SSAVLVRRNSDAAPMAEALAAQGVPAEVVGLTGLLGLPEVADTVAMLRLVADPTAGPAAL
RVLTGPRWRLGAHDLVVLWRRATGFGRGGAPAVGPDVGEEADIPCLADAISDPGTPDEYS
PEGWKRLTALRRELSALRARLGMPLTDLIAEVQRVLALDVELVAGRRGEGLDQLRAFTDV
AAGFAESADQSDPVGVVSAFLQYLDAAWEIEKGLAPVEVAASPGRVQILTVHSAKGLEWD
VVAVPHLSAGVFPSGVAAPTWLTSATELPPLVRGDRASQGDQFGVPQLDTEGITNRKQLA
DAIARHKDSLATRRIDEERRLLYVAVTRCAEQLFVSGHHWGQTGLKPKGPSDFLVELRDV
IESAAAEGVPCGTVERWAPEPPAGERNPMLDQTVEAQWPADPLAGRRDDIEAGARLVRAA
LADGAALTMEDDDDTDGWEADVDALLREREQGHRRPEMTLPQHLSVTSLVELRQDPQALA
RRLARPRPTRPDLDARRGTAFHSWVQRHYGSVRLIDFEDLPGDGYGSFEDAEDLAALQSA
FLESEWADRTPVEVEVPFEISVAGIVVRGRIDAVFGPDSAEDTWTVVDWKTGHEPAGDEM
KAAALQLAVYRRAWASLREIDPARVRAVFHYVRSGRTVAPTELPDLPHAEELAELTRD
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgcatactcgcccgccgagctatcgagggttttggggcttttcgaacccaccgat
gagcaggcggccgttatcggggcacctcccggcccgatggtggtgatcgccggcgccggt
gcgggtaagaccgagacgatggccgctcgggtggtgtggctggtggcgaatggctatgcc
acccccggtcaggtgctcgggttgacgttcacccgcaaggccgcggcccagttgctgcgc
cgtgtcagatctcggctcgcccggctggcgggaagcgggatcctggctcccgtcgccgcc
gacgagcccgatcccgtcattgccacctatcacgcctatgccggaacgttgttgcgcgag
cacgggctgctgctgcccatggaacccaatgcgcgtctgctgaccgaaacacagttatgg
cagctggccttccggttggtctgtgatttcgatggagacctggacaccgagaagacgccc
ggcgctgtcaccgctcaggtgctggcgctggcggggcagctttccgagcatctggtgaac
accaccgatctgttgtcatcgcacgatgagctcgagcggctgatcctcacgctgcctccc
ggcccgcgccagcgtgagggtgggccgagcgcctggctgctgcgattgatcgaaacacag
cgtgagcgaacgcagctgatggcgatcgtggagcagctgattgcgctgatgcgtacccgc
ggtgttctcgatttcggtgcacagatggcgttgtcggcgcggttggccgccgatcatccc
atcgtcggacagactcagcgagagcgctaccgagtggtgctgttggacgaataccaggac
acggggcatgcccaacgcatcttgttgtcgtccttgttcggtcggggcgttgacccggac
ctggcgttgaccgccgtgggcgatcccatccagtcgatctatggctggcggggtgcgtcg
gcgaccaatctgccccgattcaccaccgactttccgcttccggatggatcaccggcgccg
accagggaactgcgtaccagctggcgcaacccacccgaggccctgcacctggccaactcg
gtctcggaggaggcgcgtcggcgttcggtggccgtccggccgctgctgccccggccggac
gccgcctccgggcgtatcgcgtgcgcattgttgggcgacatcgctgccgagcgagaatgg
gtcgcaacgcaactggccgcggtatatgagcaggcacatcgcgaggggaaccgccctccg
tcgtcggcggtgctggtcaggcgaaacagtgacgccgcgcccatggccgaggctcttgcc
gcccaaggtgttccggccgaggtggtcggacttaccggtctgctcggacttccggaggtc
gccgacaccgtggctatgctgcgtcttgtcgccgacccgaccgctggccccgccgccctg
cgcgtgctgaccggaccccggtggcgtcttggcgcccacgatctggtggtgctgtggcgg
cgggcgacgggattcggtcgcggcggcgcgccggcggtcggcccagacgtgggagaggaa
gccgatattccgtgtctggccgatgccatcagcgatcccggtacgcccgatgaatactcg
ccggagggctggaagcgcttgaccgcactgcgacgggaactgtcggcgttgcgcgcgcga
ctcgggatgccgctcaccgacctgatcgccgaggtgcagcgagtgctcgccttggacgtc
gagcttgtcgcagggcgacgcggtgagggcctggatcagctgcgcgctttcaccgacgtt
gcggcgggattcgccgagtccgccgaccagagcgatccggtcggggtggtctccgcgttc
ctgcaatacctggacgctgcgtgggagatcgaaaaaggcctcgcgcctgtggaagtggcc
gcaagcccgggccgggtgcagattctgaccgtgcattcggccaaggggctggaatgggat
gtggtggccgtcccgcatctgagcgccggggtgttcccgtccggagtggccgcaccgacc
tggctgaccagcgccacggaactgcccccgctggtccgcggtgatcgcgccagccaggga
gatcaattcggggtgccccagctggacaccgagggcatcaccaatcgcaaacagctcgcc
gacgccatcgcccggcataaggacagcctggccacgcgccggatcgacgaggagcggcgg
ctgttgtacgtggcggttacccgttgcgctgagcagcttttcgtctcggggcaccattgg
ggtcagaccgggctcaaaccgaaggggccgtcggactttctggtcgaactacgcgatgtc
attgagtccgctgccgccgaaggcgttccgtgcggaaccgtcgaacggtgggcccccgag
ccgccagcgggcgagcgcaatcccatgctcgatcagaccgtcgaagcacagtggcccgct
gacccgctcgcgggcagacgcgatgacattgaggccggcgcccggctggtgcgcgcagcg
ctcgccgacggggcggccctgaccatggaggacgatgacgataccgacggctgggaggcc
gatgtcgacgcgctgctacgggaacgcgagcagggccatcgccgcccggaaatgaccctt
cctcagcacctttcggtgaccagtttggtggagctgcggcaggatccgcaggccctggcc
cgcaggctggctcgcccgcgccccacccgtccggacctggacgctcgtcggggcaccgcg
ttccactcctgggtgcagcgtcactacgggtcggtgcggctcatcgatttcgaagacttg
cctggcgacggctacggaagtttcgaggacgccgaggacctggcggcgctgcagtcggcg
ttcctggagtccgaatgggccgaccgaaccccggtagaggttgaggtgccgttcgagatt
tcggtggcggggatcgtcgtgcgtggtcgcatcgacgccgtgttcggacccgacagcgcc
gaggacacgtggacggtcgtggactggaagacgggtcacgagccggcgggtgatgagatg
aaggccgccgcgctgcagctggccgtgtaccggcgcgcgtgggcgtcgttacgggaaatc
gatcccgcgcgggtgcgtgccgtgttccattacgtgcgctcgggtcgtacggtggcgccc
acagagctgcccgatttgccgcacgcggaggagctcgcggagctgacccgggattga
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