Mycobacteroides abscessus ATCC 19977: MAB_3770c
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Entry
MAB_3770c CDS
T00657
Name
(GenBank) DNA-directed RNA polymerase alpha chain RpoA
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mab
Mycobacteroides abscessus ATCC 19977
Pathway
mab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MAB_3770c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mab03021
]
MAB_3770c
03400 DNA repair and recombination proteins [BR:
mab03400
]
MAB_3770c
Enzymes [BR:
mab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MAB_3770c
Transcription machinery [BR:
mab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MAB_3770c
DNA repair and recombination proteins [BR:
mab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MAB_3770c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF6327
Motif
Other DBs
NCBI-ProteinID:
CAM63844
UniProt:
B1MG99
LinkDB
All DBs
Position
complement(3827104..3828156)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLSEETLAENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKSLVVSSEEDEPVTMYLRKQGPGAVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYNVEA
TRVEQRTDFDKLVLDVETKNSISPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIEDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPTSFDPSEVAGYDVATGTWSDTGSYDFDGDQDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttctcagcgacccaccctgtccgaggagacgctggccgagaaccggtcgcgc
ttcgtcatcgagcccctggagccgggattcggctacaccctgggcaactcgctgcggcgc
accctgttgtcgtccatcccgggcgcggccgtcaccagcatccgtatcgacggtgtgctg
cacgagttcaccaccgttcccggggtgaaggaagacgtcaccgacatcatcctgaacctc
aagagcctcgtggtgtcctcggaggaggacgagccggtcaccatgtacctgcgcaagcag
ggcccgggtgccgtcaccgccggtgacatcgtgccgcccgccggtgtgaccgtgcacaac
cccgatatgcacatcgcgacgctgaacgacaagggcaagctggagatcgagctcgttgtc
gagcgtggtcgcggttacgtcccggccgtgcagaacaaggcctcgggtgccgagatcggt
cgtatccccgtcgattccatctactcgccggtgctcaaggtgacctacaacgttgaggcc
acccgtgtcgagcagcgcaccgacttcgacaagctggtgctggatgtcgagaccaagaac
tcgatcagcccacgcgacgcgctggcgtcggccggcaagacgctggtcgagctgttcggt
ctggcacgagagctcaacgtcgaggccgagggtatcgagatcgggccgtcaccggccgag
gccgaccacatcgcctcgttcgcactgcccattgaggatctggacctgaccgtccgctcg
tacaactgcctcaagcgcgagggtgtgcacaccgtcggcgagctggtcgcccgcaccgaa
tcggacctgctggacatccgcaacttcggccagaagtccatcgacgaagtgaaaatcaag
ctgcaccagctgggtctgtcgctcaaggacagcccgaccagctttgatccctcagaggtc
gctggatacgacgtcgccaccggcacctggtcggacaccggctcgtatgacttcgacggc
gatcaggacttcgccgaaaccgaacagctctaa
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