Mycobacteroides abscessus subsp. bolletii 50594: MASS_0392
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Entry
MASS_0392 CDS
T02682
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mabb
Mycobacteroides abscessus subsp. bolletii 50594
Pathway
mabb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mabb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MASS_0392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mabb03400
]
MASS_0392
Enzymes [BR:
mabb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MASS_0392
DNA repair and recombination proteins [BR:
mabb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MASS_0392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
PDDEXK_1
UvrD_C_2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGM26994
UniProt:
A0AB33A5H2
LinkDB
All DBs
Position
complement(422041..425286)
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AA seq
1081 aa
AA seq
DB search
MKRFDLLGPLPADRSTTVLEASAGTGKTFALAGLVTRYVAEGVATLDQMLLITFGRAASQ
ELRDRVRGQIVDALRAFADPSTARTDLTQYLVSAERDTRQRRLRDALAGFDAATIATTHQ
FCHIVLKSLGVAGDSDSGVTLVENLDELVCEIVNDRYLTHFGKERDTPPLSYPAALRLAR
EVVRNPATQLRPLQPEADSYALAALSFARDVLEQLEIRKRRRGILGFDDLLTRLADALDA
PDSPARVRMHQRWPIVMVDEFQDTDPVQWQVLERAFSGRSTLVLIGDPKQAIYAFRGGDI
ETYLRAAATAGDKQTLGTNWRSDAALVDRLQVVLRGAQLGGPDIVVHDVQAHHQGHRLAG
APHNDPFRLRVVSRNRDGIKVIPIADLRRSIGRDLAADIGALLSSGATFDGRPVRARDIA
VIVEAHKDARACHTALAEAGIPAVYTGDTDVFSSDAAQDWLYLLEAFDQPHRSGLVRAAA
ATVFFGETAETLAVGGESLTDEIAGTLRIWAARARERGVAAVFEAAQLAGMGERVLSWRG
GERMMTDLAHLTELLQETAHRNGFGPAALRDWLRTQCSEGGAEAERNRRLDSDAAAVQIM
TVWVSKGLQFPIVYLPFSFNRYVPEREYVLYHENGLRCLHIGGQEGPDYSMADLAGRTEA
ARDASRLAYVALTRAQSQVVAWWAPSFDEPNGGLSRLLRGRAPGNPSVPDKCSPAKISDA
DALERLRAWEAQGGPVIEDALVTGFVPAATSSPSDDLAVRVFDRPIDTAWRRTSYSGLLR
AAEESGVSSEPEVAELDDEVDDIPLRSIPAGADVPSPMAQLPAGAAFGSLVHAVLETTDP
LAPDLVAELQTQIIRHRERWPVEVPAAELAAALEPMHDTPLGPLLPGVTLRQIGLRDRLC
ELDFEFPLAGGDAAEDSFARLADVGMLLREHLAADDPLGVYASRLTGPGLGGQSLRGYLS
GSVDAVLRVGSRYVVVDYKTNWLGTGDAPLTAADYSRPRMVEAMLHSDYPLQALLYSVVL
HRFLSWRLPGYRPEEHLGGAVYLFVRGMCGAATPVEDGHPAGVFSWQPPSALVVALSELL
S
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtttcgacctgctggggccgctgcccgcggatcgctccaccacggtgttggag
gccagcgcgggtaccgggaagaccttcgcattggcgggtctggtcacccggtacgtcgcc
gagggcgtcgcgacgctggaccagatgctgctcatcaccttcgggcgtgcggccagccag
gagctccgggatcgagtgcgcggccagatcgtggatgccctacgggctttcgcggatccg
tcgacggcacgcacggatctgacgcagtatctggtctccgccgagcgggacacacgccaa
cggcggctgcgggatgcgctcgccggcttcgacgcggcgaccatcgcgaccacacaccag
ttctgccacatcgtgctgaagtccctgggtgtggcgggcgacagcgattccggtgtgacg
ctcgtggaaaacctggacgagctggtgtgcgagatcgtgaacgaccggtacctgacgcat
ttcggcaaggagcgtgacaccccgccgctgagctatccggcggcattacgcctggccagg
gaggtggtgcgcaacccggcgacacagctgcgcccgctgcaacccgaggccgattcgtat
gcgttggcggccctgagcttcgcccgcgatgtactggagcagctggaaatccgtaagcgc
cgccgcggcatcctcggcttcgatgatctgttgacccgtctggcggacgcactggacgct
ccggactctcccgcacgggtgcggatgcaccagcggtggcccatcgtcatggtggatgag
tttcaggacaccgatccggtgcagtggcaggtactggaacgggccttctcgggccgctcc
acgttggttctgatcggcgaccccaagcaggccatctacgcgttccgcggcggggacatc
gagacgtatctgcgcgcggcagccacggccggcgacaagcagacgctgggtaccaactgg
cgtagcgacgccgcgctggtcgatcggctgcaggtggtgctgcggggggcgcagctcggc
ggcccggacatcgtggttcacgacgtgcaggcacaccatcagggtcatcggctggcgggc
gctccccacaacgatccgtttcggttacgggtagtgtcgcgaaatcgagacggtatcaag
gtgattcccattgccgatctgcggcgcagcatcggtagagatctggccgccgatatcggg
gcattgttgtccagtggcgccaccttcgacggccgcccagtgcgggcccgagatatcgcg
gtgattgtcgaggcgcacaaggatgctcgcgcgtgccataccgcgctggccgaggcaggc
attcccgccgtctataccggtgacaccgacgtgttcagttccgatgcggcacaggactgg
ttgtacctgttggaggcattcgatcagccgcaccgctccggtctggtgcgcgcggcggca
gcgaccgtgttcttcggcgagacggcggaaacccttgccgtgggcggtgaatcgctgacc
gacgagatagcgggcaccctgcgcatctgggcggcacgagcccgcgagcgcggggttgcg
gcggtgttcgaggccgcgcaactggccgggatgggtgagcgggtgctgtcgtggcgcggc
ggcgagcgcatgatgaccgatctcgcccacctgacggaactgttgcaggaaacggcacac
cgcaatggcttcgggccggccgcgctgcgcgactggttacgcacccagtgctcggagggc
ggggctgaggccgaacgcaaccggcgcctggacagcgacgccgcggcagtgcagatcatg
acggtgtgggtgagcaaggggttgcaattccccatcgtgtatctgccattctccttcaat
cggtatgtaccggaacgggagtacgtgctgtaccacgagaacgggctgcgttgcctgcac
atcggcggccaggagggcccggactattcgatggccgatttggcgggccgcaccgaggcg
gcccgtgatgccagtcggctcgcctatgtggcgctgacacgggcacagtctcaggtggtg
gcgtggtgggcaccatccttcgatgaacccaacggcgggctgtcccggctgttgcgaggg
cgtgcacccgggaatccgtcggtgcccgacaaatgttctccggccaagatttccgacgcg
gacgcactcgagcggctgcgggcctgggaagcccagggcggcccggtgatcgaggacgcg
ctggtgaccggattcgttcctgctgccacatcgtcaccttccgacgatctcgcggtccgg
gtgttcgatcggccgatcgatactgcctggcggcgcacgtcgtattcggggctgctgcgg
gccgccgaagagtcaggcgtttcgagcgaaccggaggtcgccgagctggacgacgaggtg
gatgacattcccttgcggtcaataccggccggtgccgatgtgccctcgccgatggcgcag
ctgcccgccggcgcggcctttggttcgttggtgcacgcggtgctggagaccacggatccg
ttggcgccggacctggtggcggaactacagacacagatcatccggcaccgggagcgttgg
ccggtcgaagttccggcggcagagttggccgccgcactggagccgatgcacgacactccg
ctgggcccgctgctgccgggtgtgacgctgcgccagatcgggctgcgggatcggttgtgc
gagctagatttcgagttcccgttggccggcggagacgcggccgaggactcgttcgcgcgg
ctggcggacgtgggcatgctgctgagagagcatctcgcggccgatgatccgctgggggtg
tacgcgtcacgtctcaccggtcccgggctgggcgggcagagcctgcgcggatatctgtcc
ggttccgtagatgcggtgctgcgggttggctctcggtacgtggtggtcgactacaagacc
aactggctggggaccggcgacgctccgctgacggccgctgattattcgcggccacggatg
gtcgaggccatgctgcattcggactatccgctgcaggcgttgctgtacagcgttgtactg
catcgattcctgtcctggcggctgccgggatatcggccagaagaacatctgggcggcgcc
gtgtatctgtttgtgcgcggaatgtgtggcgcggctaccccggtggaagacgggcatccg
gccggggtgttcagctggcagccgccctcggcgttggtggtcgcgctgtcggagctgctg
tcatga
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