Mycobacteroides abscessus subsp. bolletii 50594: MASS_1959
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Entry
MASS_1959 CDS
T02682
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mabb
Mycobacteroides abscessus subsp. bolletii 50594
Pathway
mabb03030
DNA replication
mabb03430
Mismatch repair
mabb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mabb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MASS_1959
03430 Mismatch repair
MASS_1959
03440 Homologous recombination
MASS_1959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mabb03032
]
MASS_1959
03400 DNA repair and recombination proteins [BR:
mabb03400
]
MASS_1959
Enzymes [BR:
mabb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MASS_1959
DNA replication proteins [BR:
mabb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MASS_1959
DNA repair and recombination proteins [BR:
mabb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MASS_1959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
EAD7
RNase_H_2
DUF7071
Motif
Other DBs
NCBI-ProteinID:
AGM28561
UniProt:
A0AB33AA30
LinkDB
All DBs
Position
complement(1985497..1987299)
Genome browser
AA seq
600 aa
AA seq
DB search
MTRRDALHASGSSQLTFDEVGTLRDTTFVVVDLETTGGSAENDAITEIGAVKVRGGEVLG
ELATLVDPQRSLPPQIVRLTGITSAMLVDAPPIAQVLPAFLEFARGAVLVAHNAGFDIGF
LKAAARQCGIDWPQPAVLCTVRLARRVLSRDEAPRVSLGALAQLLGASTTPNHRALDDAR
ATVDVLHALIARVGNQGVGTVNELRSYRTQVPSALRGKRHLADGMPYAPGVYLFRGPSGE
VLYVGTAVNLRRRVQQYFTGADPRGRMREMVTIATAVDHVICAHPLEAAVRELRLLGAHA
PPYNRKSRFPHRWWWVVLTEEPFPRFSVVRTTNGRPTLGPFRVRDDATTAALALARFTGV
RTCTNRIGAGGRHGPACDGQSYPHDTASPCPAAAGVDATAYRDGLAPALAVLDGTHGQPL
QAMCDRVAELGALRRYETAARQRDATTALIEVLARQHRLHALARIEELIAARPDGDGGWQ
IAVVRHGQLAGAAVARRGVPPMPVVTAASASAQVVLPTLEPFGGAAPEETGLITRWLAEP
GVRIVSSTDGYAEATGCAASLRNWAAAARSARMATALHQDDWGMAELTRVATPARPRVAG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggcgtgatgctctgcacgcaagcggctcatcgcagctgaccttcgacgaggtg
ggcacgctgcgcgacaccacctttgtggtggtggacctggagaccaccggcggcagcgct
gaaaacgacgcgatcaccgagatcggcgccgtgaaggtgcgtggtggcgaggtactcggg
gaactggccaccctggtcgatccccagcgatcgctaccgccgcagatcgtgcgcctcacc
ggcatcacctcggcgatgctggtcgacgcaccgccgatcgcacaggtcctgccggctttt
ctcgaattcgcccgtggtgcggtactggtcgctcacaatgccggcttcgatatcgggttc
ctcaaggcggcggcacggcaatgtggaatcgactggccacagcccgccgttctgtgcacg
gtccggctagcccgccgggtgctctcccgcgatgaggccccgcgcgtcagcctgggtgcg
ctggcgcagctgctcggcgcgtccaccacacccaatcaccgggctctcgacgatgcccgg
gccaccgttgatgtcctccacgcgctgatcgcccgggtcggcaaccagggcgtcggcacc
gtgaacgagctgcgcagctatcgcacccaggtgcccagcgccctgcgcggcaagcgccac
ctggccgacggaatgccttatgccccaggcgtttacctattccgcggaccatcgggcgag
gtgttgtacgtcggcaccgccgtcaacctgcgtcgacgggtacagcagtacttcaccggg
gcagatccgcgcggccggatgcgtgagatggtcaccatcgcgaccgcggtggaccatgtc
atctgcgcgcatccactggaggctgcggtgcgcgaactgcggttgttgggtgcgcacgca
cccccgtacaaccgcaaatcccggttcccgcaccgctggtggtgggtggtgctcaccgag
gaaccgtttccccgattctccgtcgtccgcaccaccaacgggcggccgacgctcggcccg
tttcgcgtacgcgacgacgcgacaaccgccgcactggccctcgcccggttcaccggcgta
cgcacctgcaccaaccgcatcggcgcgggcggcagacacggccccgcttgtgacggccag
tcgtatccacacgacaccgcctcgccctgccccgctgctgccggggtggacgcgaccgcc
taccgggacgggctcgcccccgcgctcgccgtcctggacggcacacacgggcaaccgctg
caggccatgtgcgacagggttgccgagctgggtgccctgcggcgctatgaaaccgctgcg
cggcaacgcgatgcgaccacggcactcatcgaggtgctggcccgccagcatcgtctgcat
gccctcgcacgcatcgaagagctgattgccgcccgccctgatggcgacggcggatggcag
atcgcggtggtgcgacacggacagcttgccggggccgcggtggcccgacggggtgtgccg
ccgatgccggtggtgactgcggcctccgcgtccgcacaggtggtactgcccaccctcgaa
ccgttcggcggtgccgcgcccgaggagaccgggctgatcacccgctggctggccgagccc
ggagtccgcatcgtgtcctcgacggatggctatgccgaggcgaccggatgtgccgcatcg
ctgcggaattgggccgcggcggcacgcagtgcgcgcatggcaaccgcccttcaccaggac
gactggggaatggccgagctgactagggtcgcgacccctgcccggccccgagtcgctggc
tga
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