Mycobacteroides abscessus subsp. bolletii 50594: MASS_2257
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Entry
MASS_2257 CDS
T02682
Name
(GenBank) putative 3-methyladenine DNA glycosylase AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mabb
Mycobacteroides abscessus subsp. bolletii 50594
Pathway
mabb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mabb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MASS_2257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mabb03000
]
MASS_2257
03400 DNA repair and recombination proteins [BR:
mabb03400
]
MASS_2257
Enzymes [BR:
mabb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MASS_2257
Transcription factors [BR:
mabb03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MASS_2257
DNA repair and recombination proteins [BR:
mabb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MASS_2257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AGM28859
UniProt:
A0AB33AAY4
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All DBs
Position
complement(2319608..2321089)
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AA seq
493 aa
AA seq
DB search
MELDAEACYRAVQSRDTRFDGQFFTAVHTTGIYCRPSCPAITPKRQNVSFHPTAASAQAA
GYRACRRCLPDAAPGSPLWNIKSDLAVRAMRLIGDGLVERDGVDGLSRALGYSSRQLNRV
LLAELGASPLALARANRATTARVLIQRTDLPMSDIAFAAGFSSIRQFNDTIAAVFATTPS
KLRTELPRKECPAPEPIPGAVSLKLPLRQPHNIAWSTWLLEHHCARGVEDFSDGRYTRAL
RMPHGPVIATLMVSADQVRADLQLTDMRDLAPAVARLRHLLDLDADPSAVDEALLSHPAL
APLVTEAPGIRVPGTVDGAELLLRTMIGQQISVAAANTATASLVAALGEEVTDATGRVTH
LFPTAETVAAAAQEVMAGPAARIAAIAGAADRLATGKLELHPGMTGTDLRRQLLDIKGIG
PWTADYVVMRQLADPDVLLEHDLVLRRGAAAAGVAMATARASSPWRSYVSMHLWRKGIAA
LPRQLTRKPKGKS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgacgcggaggcctgctaccgggccgttcaatcccgcgacacacgattcgac
gggcagttcttcaccgccgtgcacaccaccggaatctactgtcggccatcctgtcccgcc
atcacgccgaaacgacagaacgtttccttccaccccaccgccgcctcggcgcaggcggcg
ggataccgggcctgccggcgctgccttcccgacgcagcaccgggatcgccattgtggaat
atcaagtctgatttggccgtccgcgcgatgcgacttatcggggacggcctggtcgagcgc
gacggtgtagacgggctgtcccgggcactcggatactcgagtcgccagctgaacagggtc
ctgctggccgagctcggagcgagcccactggcacttgcccgtgccaatcgggccaccacg
gcgcgggtactgattcagcgcactgatctgccgatgtccgatatcgcctttgccgcaggt
ttttccagcattcgacaattcaacgacacgatcgccgcagtcttcgcgaccacaccctcg
aagctacggaccgagctcccccgcaaggaatgtcccgcgccggaacccattcccggcgcc
gtcagcctcaaacttcctctacggcagccacacaacatcgcatggtcaacgtggctgttg
gaacatcattgcgcgcgaggcgtagaggatttttccgacggccggtacacgcgggcgttg
cggatgccgcatgggccggtgatcgcgacgttgatggtcagcgccgaccaggtgcgggcc
gacttgcagctcacggacatgcgcgacttggcccccgcggtcgcacgcctgcgccacctg
ctggatctggacgccgatccgtcggctgtcgacgaagccctcctgtcacaccccgccctt
gccccactggtgaccgaggctccggggatcagggttccagggaccgtcgacggtgcagag
ctattgttgcgcaccatgatcggccagcaaatctccgtggcggcggccaatacggcgacg
gcctcgctggtggcggcccttggcgaggaagttaccgacgccacgggacgagtaacccat
ctttttccgaccgccgaaaccgttgctgccgcagcccaggaggtcatggccgggccagcg
gcgcggatcgcagcgatcgccggggccgccgacagactcgcaacaggcaagttggagttg
catcctggcatgactggcaccgatctacgtcggcagttgttggatatcaaggggattggt
ccatggaccgcagactacgtggtcatgcgccaactggccgaccccgacgtgctgctggaa
cacgatcttgtgctgcggcgcggagccgccgcagcaggtgtcgccatggcaaccgcgcgt
gctagttcgccatggcgctcttatgtctccatgcacctgtggcgcaagggaatcgccgcg
ctaccgcggcaacttactcgcaaaccgaaaggaaaatcgtga
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