Mycobacteroides abscessus subsp. bolletii 50594: MASS_3544
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Entry
MASS_3544 CDS
T02682
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mabb
Mycobacteroides abscessus subsp. bolletii 50594
Pathway
mabb03420
Nucleotide excision repair
mabb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mabb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MASS_3544
03430 Mismatch repair
MASS_3544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mabb03400
]
MASS_3544
Enzymes [BR:
mabb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MASS_3544
DNA repair and recombination proteins [BR:
mabb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MASS_3544
MMR (mismatch excision repair)
Other MMR factors
MASS_3544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
ComJ
Motif
Other DBs
NCBI-ProteinID:
AGM30146
UniProt:
A0AB33AF31
LinkDB
All DBs
Position
complement(3550919..3554155)
Genome browser
AA seq
1078 aa
AA seq
DB search
MNAYSPAELSRALGLFEPTDEQSAVIGAPPGPMVVIAGAGAGKTETMAARVVWLVANGYA
TPGQVLGLTFTRKAAGQLLRRVRSRLARLAGSGILAPVAADEPDPVIATYHAYAGTLLRE
HGLLLPMEPNARLLTETQLWQLAFRLVCDFDGDLDTEKTPGAVTAQVLALAGQLSEHLVD
TTDLLSSHDELERLILTLPPGPRQREGGPSAWLLRLIETQRERTQLMAIVEQLIALMRTR
GVLDFGAQMALSARLAADHPIVGQTQRERYRVVLLDEYQDTGHAQRILLSSLFGRGVDPE
LALTAVGDPIQSIYGWRGASATNLPRFTTDFPLPDGSPAPTRELRTSWRNPPEALHLANS
VSEEARRRSVAVRPLLPRPDAASGHIACALLGDIAAEREWVATQLAAVYEQAHREGNRPP
SSAVLVRRNSDAAPMAEALAAQGVPAEVVGLTGLLGLPEVADTVAMLRLVADPTAGPAAL
RVLTGPRWRLGAHDLVVLWRRATGFGRGGAPAAGPDVGEEADIPCLADAISDPGTPDEYS
PEGWTRLTALRRELSALRARLGMPLTDLIAEVQRVLALDVELVAGRRGGGLDQLRAFTDV
AAGFAESADQSDPVGVVSAFLQYLDAAWEIEKGLAPVEVAASPGRVQILTVHSAKGLEWD
VVAVPHLSAGVFPSGVAAPTWLTSATELPPLVRGDRASQGDQFGVPQLDTEGITNRKQLA
DAIARHKDSLATRRIDEERRLLYVAVTRCAEQLFVSGHHWGQTGLKPKGPSDFLVELRDV
IESAAAEGVPCGTVEQWAPEPPAGERNPMLDQTVEAQWPADPLVGRRDDIEAGARLVRAA
LADGAALPMENDDDTDGWEADVDALLREREQAHRRPEMTLPQHLSVTSLVELRQDPQALA
RRLARPRPTRPDLDARRGTAFHSWVQRHYGAVRLIDFEDLPGDGYGSFEDAEDLAALQSA
FLESEWADRTPVEVEVPFEISVAGIVVRGRIDAVFGPDSPEGTWTVVDWKTGHEPAGDEM
KAAALQLAVYRRAWASLREIDPARVRAVFHYVRSGRTVAPTELPELPHAEELAELTRD
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgcgtactcgcccgccgagctatcgagggctttggggcttttcgaacccaccgat
gagcagtcggccgttatcggggcacctcccggcccgatggtggtgatcgcgggcgccggt
gcgggcaagaccgagacgatggccgcccgggtggtgtggctggtggcgaatggctatgcc
acccccggtcaggtgctcgggttgacgttcacccgcaaggccgcgggccagttgttgcgc
cgtgtcagatcgcggctggcccggctggcgggaagcgggatcctggctcccgtcgccgcc
gacgagcccgatcccgtcatcgccacctatcacgcctatgccggaacgttgttgcgcgag
cacgggctgctgctgcccatggaacccaatgcgcgtctgctgaccgaaacacagttatgg
cagctggccttccggttggtctgtgatttcgatggagacctcgacaccgagaagacgccc
ggcgctgtcaccgctcaggtgctggcgctggcggggcagctttccgagcatctggtggac
accaccgatctgttgtcatcgcacgatgagctcgaacggctgatcctcacgctgcctccc
ggcccgcgccagcgtgagggtgggccgagcgcttggctgctgcgattgatcgaaacacag
cgtgagcgaacgcagctgatggcgatcgtggagcagctgattgcgctgatgcgtacccgc
ggtgttctcgatttcggtgcacagatggcgttgtcggcgcggttagccgccgaccatccc
atcgtcggacagactcagcgagagcgctaccgagtggtgctgttggacgaataccaggac
acggggcatgcccaacgcatcttgttgtcgtccttgttcggtcggggcgttgacccggaa
ctggcgttgaccgccgtaggtgatcccatccagtcgatctatggctggcggggtgcgtcg
gcgaccaatctgccccgattcaccaccgactttccgctgccggatggatcaccggcgcca
accagggaactgcgtaccagctggcgcaacccacccgaggccctgcacctggccaactcg
gtctcggaggaggcgcgtcggcgttcggtggccgtccggccgctgctgcctcggccggac
gctgcctccgggcatatcgcgtgcgccctgttgggtgacatcgctgccgagcgagaatgg
gtcgcaacacaactggccgcggtatatgagcaggcacatcgcgagggaaaccgccctccg
tcgtcggcggtgctggtcaggcgaaacagtgacgccgcgcccatggccgaggctcttgcc
gcccaaggtgttccggccgaggtggtcggacttaccggtctgctcggacttccggaggtc
gccgacaccgtagccatgctgcgtcttgtcgccgacccgaccgctggccccgccgccctg
cgcgtgctgaccggaccccggtggcgtcttggcgcccacgatctggtggtgctgtggcgg
cgggcgacgggattcggccgcggcggcgcaccggcggccggcccggacgtgggagaggaa
gccgatattccgtgtctggccgatgccatcagcgatcccggtacgcccgatgaatactcg
ccggagggctggacgcgcctgaccgcactgcgacgggaactgtcggcgttgcgcgcgcga
ctcgggatgccgctcaccgacctgatcgccgaggtgcagcgggtactcgccttggacgtc
gagcttgtcgcagggcgacgcggcgggggcctggatcagctgcgtgctttcaccgacgtt
gcggcgggattcgccgagtccgccgaccagagtgatccggtcggggtagtctccgcattc
ctccaatacctggacgccgcgtgggagatcgaaaaaggcctcgcgcctgtggaagtggcg
gcaagcccgggccgggtgcagattctgaccgtgcattcggccaaggggctggaatgggat
gtggtggccgtcccgcatttgagcgccggggtgttcccgtccggagtggccgcaccgacc
tggctgaccagcgccacggaactgcccccgctggtccgcggtgatcgcgccagccaggga
gatcaattcggggtgccccagctggacaccgagggcatcaccaatcgcaaacagctcgcc
gacgccatcgcccggcacaaggacagcctggccacgcgccggatcgatgaggagcggcgg
ctgttgtacgtggcggttacccgttgcgctgagcaacttttcgtctcggggcaccattgg
ggtcagaccgggctcaaaccgaagggcccgtcggactttctggtcgaactacgcgatgtc
atcgagtccgctgccgccgaaggcgttccgtgcggaaccgtcgaacagtgggcccccgag
ccgccagcgggcgagcgcaatcccatgctcgaccagaccgtcgaagcacagtggcccgct
gacccgctcgtgggccgacgcgatgacattgaggccggcgcccggctggtgcgcgcagcg
ctcgccgacggggcggccctgcccatggagaacgatgacgataccgacggctgggaggcc
gatgtcgacgcgctgctacgggaacgcgagcaggcccatcgccgtccggaaatgactctt
cctcagcacctttcggtgaccagtttggtggagctgcggcaggatccgcaggccctggcc
cgcaggctggctcgcccgcgccccacccgtccggacctggacgctcgtcggggcaccgcg
ttccactcctgggtgcagcgtcactacggggcggtgcggctcatcgatttcgaagacttg
cccggcgacggctacggaagtttcgaggatgccgaggacctggcggcgctgcagtcggcg
ttcctggagtccgaatgggccgaccgaaccccggtagaggttgaggtgccgttcgagatt
tcggtggcagggatcgtcgtgcgtggtcgcatcgacgccgtgttcggacccgacagcccc
gagggcacgtggacggtcgtggactggaagacaggtcatgagccggcgggtgatgagatg
aaggccgccgcgctgcagctggccgtgtaccggcgcgcgtgggcgtcgttacgggaaatc
gatcccgcgcgggtgcgtgccgtgttccattacgtgcgctcgggccgtacggtggccccc
acagagctgcccgagttgccgcacgcggaggagctcgcggagctgacccgggattga
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