KEGG   Mycobacteroides abscessus subsp. bolletii 50594: MASS_3663
Entry
MASS_3663         CDS       T02682                                 
Name
(GenBank) ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mabb  Mycobacteroides abscessus subsp. bolletii 50594
Brite
KEGG Orthology (KO) [BR:mabb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mabb03400]
    MASS_3663
Enzymes [BR:mabb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MASS_3663
    5.6.2.6  RNA 3'-5' helicase
     MASS_3663
DNA repair and recombination proteins [BR:mabb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MASS_3663
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_4th_Lhr WHD_3rd_Lhr DEAD Helicase_C ResIII AlkZ-like PhoH AAA_25 DUF6406 AbiEi_4 AAA_22
Other DBs
NCBI-ProteinID: AGM30265
UniProt: A0AB33AEH1
LinkDB
Position
3671259..3675812
AA seq 1517 aa
MSSEPGPLARFSAPTREWFTESFPAPTRAQSGAWQSIANGDNTLVIAPTGSGKTLAAFLW
AIDTLVQEKEAGAAAESRRLRGSRVLYVSPLKALAVDVERNLRAPLAGIARTATRMGLPE
PAITIGVRSGDTPAQRRRTLISSPPDILITTPESLYLMLTSAARETLDTVRTVIVDEVHA
VAGTKRGAHLALSLERLDERLSQPAQRIGLSATVKPAAEVARFLSGRTPATVVAPASRKT
FELSVVVPVSDMSAPESFPEPEASPDSPRGGATSLWPHVEQRIVDLIEAHRSSIVFANSR
RLAERLTARFNEIHAERLGLDLTPMPNPDVPGGPPAHIMGSGQTYGAAPLLARAHHGSVS
KEQRADIEDDLKTGRLKCVVATSSLELGIDMGAVDLVVQVEAPPSVASGLQRIGRAGHQV
GEVSRGVLFPKHRTDLLGCAVTVRRMLDGDIETLQVPANPLDILAQHTVAACALEPMDVE
KWFDVVRRSAPFTSLPRSAFDAVLDLLSGKYPSTDFAELRPRVVYDRDEGTLTGRPGAQR
LAVTSGGAIPDRGLFTVYMYAGAEGEKPSRVGELDEEMVYESRPGDVISLGATSWRITEI
THERVVVVPAFGQPGRLPFWRGDSVGRPAELGIALGQLTGELASARDAEFDKRCAAMGFD
DFATGNLRTLLTDQLRSTGAVPTDTTLIVERFRDELGDWRIVLHCPYGLRVNGPLALAIS
DRLQQRYGVSESPTATDDGIVVRLPDTDDSPPGADLFVFDATEIESIVTREVGGSALFAA
RFRECAARALLLPRRTPGRRSPLWQQRQRAAQLLDVARKHSDFPMVLEALRECLQDVYDI
GTLVRLMSGIEQRRIRIVEVQTDTPSPFAAAQLFSYIGGFMYDEDRPLAERRAAALSLDT
NLLAELMGRVELRELLDPAVIDATERQLQHLAEERKARDAEALADLFRLLGPLTAEEIAQ
RSAGPGAAWLDELVSARRVVGTSYGQRSWWAAVEDVARLRDALGVPVPPGVPAAFTDAAT
DPLGELLSRYARTHGPFTTGEAAQRFGLGVRVAADTLSAMAARGQLVRGEFTSDATDSEQ
WCDAEVLRILRRRSLAALRAQVEPVGTSAFARFLPDWQYLDSNLRGIDGVATVIEQLAGV
PIPASAWEPLILARRIRDYSPQMLDELLASGEAVWSGHGSISAQDGWIALHPSGVAPATL
AAAETVMLDDAHRAILDSLTAGGGYFFRQFGSGATRAALWDLVWAGRMTGDTFAPVRALL
GTSTTSRTAHRNRRAPRLRAYTPITTAAPVDPAVAGRWSMLPERLADGTERSHIQAELLL
GRYGVVTKGSVAAESVAGGFAWLYKVLSTFEDNGRCRRGYFVESLGGAQFASPATVDRLR
EYLDPVDDARKPYRATVLAATDPANPYGAALVWPQATSESGHRPGRKAGALAVLVDGDLA
LYIERGGKSLLSFVTDPTVLHAAALGTMELVRDGGLDGLVIERVDGRSVFDVGESAVVAA
LMEAGFARTPRGLRIRR
NT seq 4554 nt   +upstreamnt  +downstreamnt
atgagcagcgagcccggtccactcgcccggttctcggcgcccacccgggaatggttcacc
gaatcattcccggcgcccacgcgggcacagtccggcgcgtggcagtccatcgccaacggc
gataacaccctcgtcatcgcacccaccgggtccggcaagaccctcgcggccttcctgtgg
gccatcgacaccctggtgcaggagaaggaagccggggctgcggctgaatctcgccgactt
cgcgggtccagggtcctgtacgtgtcgccactcaaggcacttgccgtcgacgtcgagcgg
aacctgcgcgccccgctggccggcattgcccgcaccgcgacacggatgggcctccccgaa
ccagcgatcaccatcggcgtgcgctccggcgatacacccgcgcagcgccgccgcacgttg
atctcctcacccccggacattctcatcaccacacccgagtcgctctacttgatgctgacc
tccgccgcacgcgagaccctggacacggtgcggaccgtcattgtcgacgaggtgcacgcg
gtggccggcaccaagcggggggcgcatctggcgctctcactggagcgactggacgaacgg
ctttctcagccggcacaacgaattggcctttcggcgacggtgaagcccgccgcagaagtc
gcgcggtttctgtccggccgcactcccgccactgttgtcgctccggcgagccgcaagacc
ttcgaactgtcggtcgtcgtgcccgtctccgatatgagtgctcccgagagttttccggag
ccggaagccagccctgattcccctcggggcggcgcgacctccctatggcctcatgtcgaa
caacgcatcgtcgatctcatcgaggcgcaccggtcgagcatcgtcttcgccaactcacgc
cgcctcgctgagcggcttaccgcccggttcaacgagattcacgctgagcgcctcggcctc
gacctcactcccatgcccaatcccgacgtaccgggagggccgccggcgcacatcatgggc
agtggccagacctacggcgcggctcccttgctggcgagggcgcatcacggctcggtaagc
aaggaacagcgcgccgacatcgaagatgatctgaagaccgggcggctcaaatgcgtggtg
gccaccagcagcctggaactcgggatcgatatgggcgccgtggatctggtggtccaggtg
gaggcgccgccgtcggtggccagtggactgcagcggatcggccgcgccgggcaccaggtg
ggcgaggtgtctcggggtgtgctgttccccaagcaccgcaccgatttgttgggctgcgcg
gtcaccgtgcgacgcatgctcgacggcgatatcgagacgctgcaggtgcccgccaacccg
ctcgacatcctggcccagcacacggtggcagcgtgtgctctcgaacccatggatgtcgag
aagtggttcgatgtggtcagacgaagcgcccccttcacctccttaccgcgcagcgcattt
gatgcggttctcgacctactcagcggtaagtacccctctaccgatttcgccgagttacga
ccgcgcgtcgtgtacgacagagacgaaggaacactcaccggacggcccggcgcacaacgg
ctggcagtcacctccggaggtgcgatacccgatcgcggtttgttcacggtgtatatgtat
gcgggcgctgagggcgagaagccttcgcgggtaggcgaactcgacgaggaaatggtctac
gaatcacggccaggagacgtgatttcgctgggcgcgaccagctggcgtatcaccgagatc
acgcatgagcgggtggtggtggtcccggcgttcggccagccgggccgactgcccttctgg
cgcggcgactcggtagggcgccccgccgagctcggcatcgcgctgggccagctcaccggt
gagctggcctccgcacgcgatgccgagtttgacaagcgctgcgccgcgatgggattcgac
gactttgcgacgggtaacctacgtacgctattgaccgatcagctgcggtcgacgggcgct
gtccccaccgataccacgctgatcgtcgagcggttccgcgacgagcttggcgactggcgc
atcgtgctgcactgcccctatgggctacgggtcaacggcccgctggcgctggcgatctcc
gaccggctccagcagcgctacggtgtcagcgagtcacccaccgccaccgacgacggcatc
gtggtgcgcctgcccgataccgatgacagcccacccggggcagatcttttcgtcttcgac
gccacggagatcgagtcgatcgtgacacgggaggtcggcgggtcggcattgttcgccgca
cggttccgcgaatgcgcggcacgcgccctgctgctgccccgccgcacacccggacgccga
tcgccgctgtggcagcagcggcagcgggccgcccaactgctcgacgtcgcgcgtaaacat
tccgatttcccgatggtcctggaggcgttgcgcgaatgcctgcaagacgtgtacgacatc
ggcactctggtgcgattgatgtcgggtatcgagcaacggcgaatccggatcgtcgaggta
cagaccgacacgccctcacctttcgctgccgcccaattattcagctacatcggcgggttc
atgtacgacgaggatcgtccgctggccgagcgccgtgcggcggccctctccctggacacc
aatctgctggccgagctcatgggccgcgtggaactgcgtgagctgctcgacccggcggtc
atcgacgccaccgaacgccaactgcagcacctcgccgaagagcgcaaggcccgcgacgcc
gaagccctggccgatctgttccggctactgggccccctcaccgccgaagagatcgcgcag
cgcagcgccgggcccggagccgcctggctggacgaactcgtctccgcgcggagagtggtc
gggacaagctacggacaacgcagctggtgggcggcagtagaggacgtggcgcgtttacgt
gacgcgctcggggtcccggtgcctcccggtgtgccggcggcattcaccgacgcggccacc
gatccgttaggagaactgctgagtcgatacgcccggacgcatggcccgttcaccaccgga
gaggccgcgcaacgttttggcctgggggtgcgcgtggccgcggacacgctctcggcaatg
gcggcgcgcggccagctggtgcgcggtgaattcacctccgatgcgaccgattccgagcag
tggtgcgatgcggaggtgcttcgtattctgcgcaggcggtccctggccgcgctgcgcgca
caggtggagccggtcggcacctcggcgttcgcgcggttcctgcccgattggcagtacctg
gattcgaatctgcggggcatcgacggagtcgccaccgtgatcgagcagctcgccggggtg
ccgattcccgcgtcggcgtgggagccgctgatcctggcacgacgcatccgtgactactca
ccccagatgctcgacgaactgctggcctcgggcgaagcggtgtggtcgggacacggctcc
atctcggcacaggatggctggatcgcgctgcacccgagtggcgttgcgcccgccacgcta
gccgctgccgaaacggtgatgctcgatgacgcccatcgagcgatcctggacagcctcact
gcgggcggcgggtacttcttccgccagttcggttcgggtgctacgagagcagcgctatgg
gacttggtgtgggcggggcgaatgaccggagataccttcgcaccggtgcgggcactgctg
ggcaccagcaccacatcgcgcaccgcgcatcgaaaccggcgagcaccgaggctgcgcgcc
tacaccccgatcaccaccgccgcgcccgttgatcccgcagtcgccggacgctggtcgatg
cttcccgagaggctcgccgacggtaccgaacgttcacacatacaggccgagctgctgttg
ggcagatacggcgtggtgaccaagggtagcgtcgccgccgagagcgtcgcgggcggtttc
gcctggctgtacaaggttctttcgacattcgaggacaacgggcgctgtcgccgcggctat
ttcgtcgaatcgctgggcggcgcgcagttcgcctctcccgcgaccgtcgacaggcttcgt
gagtacctcgatcccgtcgatgacgcacgcaagccgtatcgggcaacagtgctggccgcg
accgatccggccaatccctatggcgcggcactggtatggccgcaggcgacatccgaatcc
ggtcaccgtccgggcaggaaagcaggggctcttgcggtgcttgtcgacggcgacctcgcc
ctctacatcgagcgaggcggcaagtcgctgctgagcttcgtgaccgaccccacggtgctg
cacgccgcggcattgggcaccatggagttggtgcgcgacggcggactcgatggcctggtg
atcgaaagagtcgacggcagatcggtcttcgatgtcggcgagtccgcggtcgtcgcggca
ctgatggaggccggattcgcccggacgccgagaggattgaggattcgccgatga

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