Mycobacteroides abscessus subsp. bolletii 50594: MASS_3780
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Entry
MASS_3780 CDS
T02682
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mabb
Mycobacteroides abscessus subsp. bolletii 50594
Pathway
mabb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mabb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MASS_3780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mabb03021
]
MASS_3780
03400 DNA repair and recombination proteins [BR:
mabb03400
]
MASS_3780
Enzymes [BR:
mabb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MASS_3780
Transcription machinery [BR:
mabb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MASS_3780
DNA repair and recombination proteins [BR:
mabb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MASS_3780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF6327
Motif
Other DBs
NCBI-ProteinID:
AGM30382
UniProt:
A0AB33AF80
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All DBs
Position
complement(3793178..3794230)
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AA seq
350 aa
AA seq
DB search
MLISQRPTLSEETLAENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKSLVVSSEEDEPVTMYLRKQGPGAVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYNVEA
TRVEQRTDFDKLVLDVETKNSISPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIEDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPTSFDPSEVAGYDVATGTWSDTGSYDFDGDQDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttctcagcgacccaccctgtccgaggagacgctggccgagaaccggtcgcgc
ttcgtcatcgagcccctggagccgggattcggctacaccctgggtaactcgctgcggcgc
accctgctgtcgtccattccgggcgcggccgtcaccagcatccgtatcgacggtgtgctg
cacgagttcaccaccgttcccggggtgaaggaagacgtcaccgacatcatcctgaacctc
aagagcctcgtggtgtcctcggaggaggacgagccggtcaccatgtacctgcgcaagcag
ggcccgggcgccgtcaccgccggtgacatcgtgccgcccgccggtgtgaccgtacacaac
cccgatatgcacatcgcgacgctgaacgacaagggcaagctggagatcgagctcgttgtc
gagcgcggtcgcggttacgtcccggccgtgcagaacaaggcctcgggtgccgagatcggt
cgtatccccgtcgattccatctactcgccggtgctcaaggtgacctacaacgttgaggcc
acccgtgtcgagcagcgcaccgacttcgacaagctggtgctggatgtcgagaccaagaac
tcgatcagcccgcgcgacgcgctggcgtcggccggcaagacgctggtcgaactgttcggt
ctggcacgcgagctcaacgtcgaggccgagggtatcgagatcgggccgtcaccggccgag
gcagaccacatcgcctcgttcgcgctgcccatcgaggatctggacctgaccgtccgctcg
tacaactgcctcaagcgcgagggtgtgcacaccgtcggcgagctggtcgcccgcaccgaa
tcggacctgctggacatccgcaacttcggccagaagtccatcgacgaagtgaaaatcaag
ctgcaccagctgggtctgtcgctcaaggacagcccgaccagcttcgatccctccgaggtc
gccggatacgacgtcgccaccggcacctggtcggacaccggctcgtacgacttcgacggc
gatcaggacttcgccgaaaccgaacagctctaa
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