Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_0805
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Entry
MMASJCM_0805 CDS
T03694
Name
(GenBank) DNA repair helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mabl
Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
Pathway
mabl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mabl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MMASJCM_0805
09124 Replication and repair
03420 Nucleotide excision repair
MMASJCM_0805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mabl03021
]
MMASJCM_0805
03400 DNA repair and recombination proteins [BR:
mabl03400
]
MMASJCM_0805
Enzymes [BR:
mabl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMASJCM_0805
Transcription machinery [BR:
mabl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MMASJCM_0805
DNA repair and recombination proteins [BR:
mabl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MMASJCM_0805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
BAP95581
LinkDB
All DBs
Position
complement(804519..806201)
Genome browser
AA seq
560 aa
AA seq
DB search
MSPRVTILDRMTDGPLIVQSDKTVLLEVDHDQADAARQAIAPFAELERAPEHVHTYRITP
LALWNARAAGHDAEQVVDALVTFSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVS
LDRAVLEEVLRHKKIAPMFGARIDDDTIQVHPSERGRIKQMLLKIGWPAEDLAGYVDGEA
HPITLAQDGWELRDYQQMAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAQATTLILVTN
TVAGRQWKRELLARTSLTEDEIGEYSGERKEIRPVTIATYQVITRRTKGEYRHLELFDSR
DWGLIVYDEVHLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWK
DIEAQGWIAPAECIEVRVTLTDNERMIYATAEADERYKLCSTAHTKINVVKSILARHPGA
PTLVIGAYLDQLDELGTELDAPVIQGSTKNAEREALFDAFRRGEIGTLVVSKVANFSIDL
PEASVAVQVSGTFGSRQEEAQRLGRLLRPKADGGQAYFYSVVSRDTLDAEYAAHRQRFLA
EQGYGYRITDADDLLGPTIG
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgcgggtcactatcctggatcgaatgaccgatggaccgctgatcgtccagtcc
gataagaccgtgttgctggaggtcgaccacgaccaggcagacgcggcgcgccaggctatc
gccccgttcgccgagctcgaacgcgctcccgaacatgtacacacctaccgcatcaccccg
ctcgcactgtggaacgcccgcgccgcgggacatgatgccgaacaggtggttgacgccctc
gtcaccttctcccgctacgcggtgccgcagccgctgctggtcgacatcgtcgacaccatg
gcgcgctacgggcgcctgcaactggtcaagcatccggcgcacggcctcaccctggtgagc
ctggaccgcgccgtgctcgaagaggtgctgcggcacaagaagatcgcccccatgttcggc
gcccgcatcgatgacgacaccatccaagtgcaccccagcgagcgtggccgcatcaagcag
atgttgctcaaaattggctggcccgcagaggatctcgcgggctatgtggacggcgaggcc
cacccgatcaccctggcgcaggatggctgggagctgcgggactatcagcagatggccgcc
gactccttctgggctggcggctccggcgtggtggtgctgccctgcggtgcgggcaagacg
ctggtgggcgccgccgcgatggccaaggcgcaggccaccacgctcattctggtcaccaac
accgttgccgggcggcagtggaaacgcgagctcctcgcgcgcacctcgttgacggaggac
gagatcggcgaatactcgggcgagcgcaaggagattcggccggtcaccatcgccacctat
caggtgattacccgccgcaccaagggcgagtatcgccacctggaactgttcgacagccgc
gactggggcctgatcgtgtacgacgaggtgcacctgctgcccgccccggtgttccggatg
accgcggacctgcagtcacggcgccgcctcggcctcaccgccaccctcatccgggaggac
ggccgtgagggcgacgtgttcagcctcattggccccaagcgctatgacgcaccatggaaa
gacattgaggcacaaggctggatcgcccccgctgaatgcatcgaggtgcgcgtgacgctc
accgacaacgagcggatgatctacgcgaccgccgaggccgacgagcgctacaagctctgt
tccacggcccacaccaagatcaacgtggtgaagtcgatcttggcccgccaccccggcgcg
ccgacattggtgatcggcgcgtacctggatcagctggatgaactgggcaccgaactggat
gcccccgtgatccagggctccaccaaaaacgccgaacgcgaggcgctcttcgacgcgttc
cggcgtggcgagatcggcaccctggtggtgtccaaggtcgccaacttctccatcgatctt
ccggaagcatctgttgccgtgcaggtttcgggaaccttcggctcgcgccaggaagaagcg
cagcgcctcgggcggctgctgcgccccaaggccgacggtgggcaggcctacttctattcg
gtggtctcgcgcgacaccctcgacgccgagtacgccgcacaccggcagcgcttcctggcc
gagcagggctacgggtaccgcatcaccgatgcggatgacctgctgggccccaccatcggt
tag
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