Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_1064
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Entry
MMASJCM_1064 CDS
T03694
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mabl
Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
Pathway
mabl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mabl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMASJCM_1064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mabl03400
]
MMASJCM_1064
Enzymes [BR:
mabl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MMASJCM_1064
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MMASJCM_1064
DNA repair and recombination proteins [BR:
mabl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MMASJCM_1064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
BAP95840
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Position
1071874..1072737
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AA seq
287 aa
AA seq
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MPELPEVEALADHLRRHATGATIGRIDISALSVLKTFDPPITALHGQTVTGATRWGKYLG
LQAGDLYLVTHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGTPGDAPGFDLTEAGTQK
RLAVWVVRDPAAVPQIASLGPDALSLTADGLADILAGTTARLKNVITDQRVIAGIGNAYS
DEILHVAKLSPFASGKTLSEGQLTALYEAMQSVLTDAVERSVGQQAATLKGEKRSGLRVH
ARTGMPCPVCGDVVREVSFADKSFQYCPTCQTGGKVLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactaccggaagtcgaggcgctcgcggatcacctgcgccgccacgccaccggg
gccaccatcggccgcattgatatatcggccctgtccgtgctcaagaccttcgatccgccg
atcaccgccttgcatggccagacggtgacgggagctactcgctggggcaagtatctggga
ctgcaagcaggggatctgtatctcgttacccacctgtcccgtgcggggtggttgcgctgg
tcggacaagctggcggcggcacccctcaagccgggaaagggccccatcgcgctgcgggtg
cacctcggaacacctggtgatgcgccaggattcgatctcacggaggccggcacccaaaaa
cggttggctgtgtgggtggtgagagatcccgccgcggtgccgcagatagcgtccctgggg
cccgacgcgctctctctcaccgccgacgggctggccgacatattggccgggaccactgcg
cgcctgaagaacgtgatcaccgaccaacgggtgatcgccggaatcggcaacgcctacagc
gacgagatcctgcatgtggccaagctgtcacccttcgccagcgggaaaacgctgtccgaa
gggcaattgaccgcattgtacgaggcgatgcagtcggttctcaccgatgcggtagagcgc
agtgttggacaacaggcggcaactcttaagggggagaagcgatccgggttacgggtgcat
gcccgcaccgggatgccctgcccggtgtgcggcgatgtggtgcgggaggtgtcattcgcc
gataagtcgttccagtactgcccgacctgccagaccggtggcaaggtgctagccgaccgt
cggctctcgcgactgctcaaataa
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