Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_1078
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Entry
MMASJCM_1078 CDS
T03694
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mabl
Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
Pathway
mabl03420
Nucleotide excision repair
mabl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mabl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MMASJCM_1078
03430 Mismatch repair
MMASJCM_1078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mabl03400
]
MMASJCM_1078
Enzymes [BR:
mabl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMASJCM_1078
DNA repair and recombination proteins [BR:
mabl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMASJCM_1078
MMR (mismatch excision repair)
Other MMR factors
MMASJCM_1078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAP95854
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All DBs
Position
1083564..1085987
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AA seq
807 aa
AA seq
DB search
MANLSEPALFDMPSDSSASSDALLDGLNPQQRAAVAHQGAPLLIVAGAGSGKTAVLTRRI
AYLLAARDVSPGQILAITFTNKAAAEMRERVGRIVANRVQSMWVSTFHSSCVRILRNQAS
LLPGLNSNFSIYDSDDSRRLLQMIGRDMGLDIKRYSPRLLATAISNLKNELISPEQAAAN
LTAGGQEGELRGDLPQIVADVYGEYQRRLRAANALDFDDLIGETVAVLQQFPQIAQFYRR
KFRHILVDEYQDTNHAQYVLVRELVGAHVDRTVDPDGPEPAELCVVGDADQSIYAFRGAT
IRNIEEFERDYPNAKTILLEQNYRSTQNILSAANSVIAKNANRREKRLWTDSGEGELIVG
YVADNEHDEASFIAREIDGLFDRGDANYGDVAVFYRTNNNSRSLEEIFIRTGIPYKVVGG
VRFYERKEIRDIVAYLRVLTNPGDAVSLRRILNTPRRGIGDRAEACVAVHAETNGIGFGE
ALADAAAGKVAMLNSRSEKAIAAFMDMLDQIRVTLRTDDPGALPDIGDVVEAVLNHTGYR
YELENSSDPQELARLDNLNELVSVAHEFSADAANAQAAGEDVPVDGEDVGAPPGSLEAFL
ERVSLVADADELPESSAGVVTMMTLHTAKGLEFPVVFVTGWEDGMFPHMRALGDPVELAE
ERRLAYVGITRARQRLYLSRAKVRSSWGQPMMNPESRFLQEIPQELIDWRRTDPLPGRIA
TGAGSYGGGGYGSGGSRAGGGSLGAPSKKRTKPLMVLETGDRVSHDKYGLGRVVEVTGVG
ESATSLIDFGSEGRVKLMHNFAPVQKL
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctttccgaaccagcactttttgacatgcccagcgactcgagtgcctccagc
gacgcgttgctcgacggcctgaacccgcagcagcgcgctgccgtcgcccaccagggcgca
ccgctgctcatcgtcgccggtgccggctcgggcaagaccgcggtgctgacccgtcgcatc
gcgtacctgctggccgcgcgggacgtcagccccggccagatcctggccatcaccttcacc
aacaaggcggcggccgagatgcgcgagcgcgtcgggcggatcgtggccaatcgggtgcag
tccatgtgggtgtcgacgttccactccagctgcgtgcgcatcctgcgtaaccaggcctcg
ctgctgcccgggcttaactccaatttctcgatatacgactcggacgattcgcggcggctg
ctgcagatgatcggtcgcgatatgggcctggacatcaagcgctattcgccacggctgctc
gccacggcgatctccaatctgaagaacgagctcatctcccccgaacaggcggcggccaac
ctcaccgccggcggccaagaaggggagctacgcggggatcttccgcagatcgtggccgat
gtgtacggcgagtaccagcgccggctgcgcgccgccaacgccttggacttcgacgatctg
atcggtgagaccgtggccgtgctgcagcagttcccgcagatcgcgcagttctatcgccgc
aagttccggcacatcctggttgacgagtaccaggacaccaaccacgcccagtacgtgttg
gtccgcgagctggtgggagctcatgtcgaccgcaccgtggacccggatggcccggagccg
gccgagctgtgcgtggtgggcgacgccgaccagtccatctacgcgttccgcggcgcgacc
atccgcaatatcgaagaattcgagcgcgactatccgaacgcgaaaactattctgctggag
caaaactatcggtccacgcagaacatattgagtgcggcgaactcggtcatcgccaaaaat
gcgaaccgccgggagaagcggttatggaccgactccggcgagggcgaactgatcgtcggc
tatgtcgcggacaacgaacacgacgaggcgtccttcatcgcccgcgagatcgacgggctc
ttcgatcgcggcgacgccaactatggtgacgtcgcggtgttctaccgcaccaacaacaat
tcgcggtcgctggaagagatcttcatccgtaccggtattccgtacaaagttgttggggga
gtgcggttttacgagcgcaaggaaatccgcgacatcgtcgcctacctgcgggtgctgacc
aacccgggcgatgcggtgagcctgcggcggatcctcaacacccctcgccggggtatcggc
gaccgggccgaggcctgcgtcgcggtacacgccgagaccaatggcatcggattcggggaa
gcgctggccgacgccgccgcgggcaaggtggcgatgctgaactctcgctccgagaaggca
attgcggccttcatggatatgctcgatcagatccgtgtcaccctgcgtaccgatgatccg
ggagcgctgcccgatatcggcgacgtggtggaggccgtgctgaaccacaccggatatcgc
tacgaactggagaacagcagcgatccgcaggagctggcacgactcgacaacctcaatgaa
ttagtcagcgtcgcacatgaattcagtgcggacgcggccaatgcgcaggcagccggggaa
gacgtgccagttgacggtgaggatgtcggtgcccctccgggcagccttgaggcattcctg
gagcgggtatcgctcgtcgccgatgcggacgagctgcccgagtccagcgccggcgtcgtc
accatgatgaccctgcacaccgccaaggggctggagttcccggtggtgttcgtgaccggc
tgggaagacggcatgttcccgcatatgcgggcgctgggtgacccggtggagctcgccgag
gaacggcggctggcctatgtcgggatcacccgggctcgccagcgtctctacctgagccgg
gccaaagttcgttcgtcgtgggggcagcccatgatgaatccggaatcacgctttctgcaa
gagattccgcaagaacttatcgactggcggcgcaccgatccgctgcctgggcggatcgcg
acgggcgccggcagttacggcggcggggggtacggatccggcggatcgcgtgcgggcggc
ggctcactgggcgctccgtccaagaaacgcaccaagccgctgatggtgctggagaccggg
gaccgggtgagtcacgacaagtacggactgggtcgcgtcgtggaggtgaccggtgtcggc
gagagcgccacttcgctcatcgacttcggcagtgagggtcgcgtgaagttgatgcacaac
ttcgcgcccgtgcagaagctctag
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