Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_1280
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Entry
MMASJCM_1280 CDS
T03694
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
mabl
Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
Pathway
mabl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mabl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MMASJCM_1280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mabl03400
]
MMASJCM_1280
Enzymes [BR:
mabl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MMASJCM_1280
DNA repair and recombination proteins [BR:
mabl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MMASJCM_1280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
BAP96056
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All DBs
Position
complement(1274430..1275662)
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AA seq
410 aa
AA seq
DB search
MADPGTSPENPWPVRAVATRVAKWIDRLGQVWVEGQLTQIDVRPGSRTVFMVLRDPAADM
SLTVTCPPDMVRSAPVKLTEGTQVVVCGKPTFYTGRGSFSLRLSEIRAVGIGELLARIER
LRQLLAAEGLFDARLKRPVPFLPARIGLITGRASAAEHDVTSVATTRWPAVQFAIRNTPV
QGPHAVAEIVAALQALDADPSVDVIVLARGGGSVEDLLPFSDETLCRAISACRTPVVSAV
GHEPDNPLSDLVADLRAATPTDAAKKLVPDAAAEQALILDLRRRSAQALRNWVQREQRGL
DQVRSRPVLADPLRMVSVRQDEIDGARNALRRDVRRLVDMESQRVEHLTARLTTLGPAAT
LARGYSVVQRVRDDGTVEVLRTVADAPVGASLRVRVSDGAVTATVTGEDS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatccgggaaccagccccgagaatccctggccggtccgggctgtcgccacccgg
gtcgccaagtggatcgaccgcctgggacaggtgtgggtggaagggcagctgacacagatc
gacgtccggcccggcagcaggaccgtgttcatggtgctgcgcgacccggcggccgatatg
tcgctgaccgtgacgtgcccgccggatatggtgcgcagcgcgccggtgaagctaacagag
ggcacccaggtggtggtgtgtggaaaacccaccttctacacggggcgcggatcgttctcg
ttgcgactgagcgagattcgtgccgtgggcatcggcgaactgcttgcccgcatcgaacgg
ttgcgtcaactactggcggccgaggggctctttgatgcgcgcttgaagcgtccggtcccg
ttcctgcctgcccgcatcggactcatcaccggccgggccagcgccgccgagcacgatgtg
acctcggtggccacgacacgctggcccgcagtgcaattcgcgatacgcaacaccccggtg
cagggcccgcacgcggtggccgagatcgtcgccgccctgcaggcgctggacgctgatcct
tcggtggatgtgatcgtgttggcccgcggcggcggcagcgtggaggatctgctgccgttc
tcggacgagaccttgtgccgggcgatttcggcctgccgcacccccgtggtgagcgcagtc
ggacatgagcccgacaacccgctctccgatctggtggcggacctgcgtgccgcgacgccc
accgacgcggccaagaaactggtgcccgacgccgcggccgagcaggcattgatcctggat
ctgcggcggcgctcggcgcaggcgctgcgcaactgggttcagcgcgagcagcgcgggttg
gatcaggtacgcagccggccggtgctggccgatccgctccggatggtctccgtacgacag
gacgaaatcgacggcgcacgaaacgctttacgtcgcgatgtacggcggctggtggacatg
gagtctcagcgggtcgagcatctgaccgcgcggctgaccacgctgggcccggcggcaacc
ctggcccgcggatactcggtggtgcagcgcgtgcgcgacgatggcaccgtggaggtgctg
cggaccgttgccgacgcacctgtcggcgcatcgctgcgagtgagagtttcagacggcgcc
gtgaccgcgaccgtgacaggagaggattcatga
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