Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_2592
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Entry
MMASJCM_2592 CDS
T03694
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mabl
Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
Pathway
mabl03030
DNA replication
mabl03410
Base excision repair
mabl03420
Nucleotide excision repair
mabl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mabl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMASJCM_2592
03410 Base excision repair
MMASJCM_2592
03420 Nucleotide excision repair
MMASJCM_2592
03440 Homologous recombination
MMASJCM_2592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mabl03032
]
MMASJCM_2592
03400 DNA repair and recombination proteins [BR:
mabl03400
]
MMASJCM_2592
Enzymes [BR:
mabl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMASJCM_2592
DNA replication proteins [BR:
mabl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MMASJCM_2592
DNA repair and recombination proteins [BR:
mabl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MMASJCM_2592
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMASJCM_2592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
BAP97368
LinkDB
All DBs
Position
complement(2599252..2601960)
Genome browser
AA seq
902 aa
AA seq
DB search
MTAPATKTGTKQPTLLLLDGNSLAFRAFYALPAENFKTQSGLTTNAVYGFTSMLINLLRD
EAPTHVAAAFDVSRKTFRSDRYPEYKATRSATPDEFRGQIDITKEVLQALGITVLAEEGF
EADDIIATLATQGQAEGFKVFVVTGDRDSLQLVNEDVTVLYPRKGVSDLTRFTPEAVVEK
YGLTPSQYPDFAALRGDPSDNLPGIPGVGEKTASKWILEYGSLQELVDKADTVRGKVGDS
LRANLASVILNRELTDLVRTVPLPYAPAQLALAPWDRDQIHRLFDDLEFRVLRDRLFETL
EAVEPEVDEGFQLAGQALEPGTVAAWLAEHTGDGRRSGLAVVGTYAPYGGDATAVAIASA
DGDGAYIDTTTVTPDDEAALAEWLADAARPKALHEAKQAIHALAGRGWELGGVTSDTALA
AYLVRPGQRSFALDDLSLRYLRRELRAEDDGEQQLSLLDEDGAGDAKAAQAQMLRARAVI
DLADALDVELERIESAGLLTDMELPVQRVLAGLESVGIAVDTDHLSSLQNQFATGIREAA
DAAYAVIGKQINLGSPKQLQVVLFDELGMPKTKKTKTGYTTDADALQTLFDKTGHPFLEH
LLTHRDVTRLKVTVDGLLKSVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPVRTEAGRE
IRDGFVVGAGYRELMTVDYSQIEMRIMAHLSADEGLIEAFNTGEDLHSFVAARAFGVPID
EVTAELRRRVKAMSYGLAYGLSAYGLATQLKISNDEAKEQMDQYFSRFGGVRDYLRAVVD
QARKDGYTSTVLGRRRYLPDLDSGDRLRREAAERAALNAPIQGSAADIIKVAMITTDKAL
RDKGLRSRMLLQVHDELLFEVAEGERESLEALVRKTMGSAYPLDVPLEVSVGYGRSWDAA
AH
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcgcctgcgacgaagaccggaaccaaacagccgaccctcctgctgctcgacggt
aactcgctggccttccgcgcgttctatgcgcttccggccgagaatttcaagacgcagtcg
ggcttgaccaccaacgcggtatacgggtttacctcgatgttgatcaatctgctgcgcgat
gaggcacccacacacgtggcggccgccttcgatgtctcccgcaagacgttccgctccgat
aggtaccccgagtacaaggccactcggtcggccacccccgacgagttccgtggacagatc
gatatcaccaaggaagtactccaggccttgggcatcacggtgctggcagaggaggggttc
gaggccgacgacatcatcgccaccctggccacccaggggcaggccgagggtttcaaggtg
ttcgtggtcacgggcgatcgcgactcgctacagctcgtcaacgaggacgtaacggtgctg
tacccacgcaagggtgtcagtgatctcacccgattcaccccggaagcggtagtcgagaag
tacggactcacgccctcccagtacccggacttcgcggcgctgcgcggtgacccgagcgat
aacctcccgggaattcctggagttggggagaagaccgcgtccaagtggatcctcgagtac
ggatcactccaagagctggtggacaaggccgataccgtgcgcggaaaggtgggggattcg
ctgcgcgccaacctcgcttcggtgatcctgaaccgcgaactgaccgatctggtgcggacg
gtgccgctgccctatgcgcccgcccagttggcgctggcgccgtgggatcgggaccagatt
caccggctgttcgacgacctcgagttccgggttctgcgcgaccggctgttcgaaaccctg
gaagcggtcgaacccgaggtggacgagggcttccagctggccggccaggcgctggagccc
ggcacggtcgccgcatggttggccgaacacaccggggatggccgccgtagcggtttggcg
gtggtcgggacctacgccccctatggcggcgatgctaccgccgtggcgatcgcgtccgcc
gatggcgacggcgcctatatcgacaccacgacggtgactccggacgatgaggcggcactg
gccgagtggctggccgatgcggcccgccccaaggcattgcatgaggcgaagcaggccata
cacgctttggccggccgcgggtgggagctcggcggagtgacctccgataccgcgctggct
gcgtatctggtgcggccggggcagcgcagcttcgcgctcgacgacttgtcgttgcggtat
ctgcgtcgcgaacttcgcgctgaagatgatggagagcaacagctctcactactggacgag
gacggcgcgggcgatgcgaaggcagctcaggcccagatgctgcgcgcccgtgcggtgatc
gatctggccgacgcgctcgatgtcgagctcgaacgcatcgaatcggcggggctgctcacc
gacatggagctgccggttcagcgggtgcttgccggtctggaatccgtcggtatcgcggtc
gataccgatcatctgtcttcgctgcaaaatcagttcgccaccggcatccgcgaggctgcg
gatgccgcgtacgccgtgatcggtaagcagatcaacctgggctcgcccaagcagctgcag
gtggtgctgttcgacgagttgggtatgcccaagaccaagaagacaaagaccggttacacc
accgacgcggacgccctgcagacgctgttcgataagaccgggcatccgtttctggagcat
ctgctcacgcaccgtgatgtcaccaggctgaaggtgactgtcgacggtttgctcaaatct
gttgcggccgacgggcgtattcacaccacgttcaaccagaccatcgcggcgaccggtcgg
ctgtcctcgaccgaaccgaacttgcagaacatcccggtacgtaccgaggccgggcgggag
atccgcgacggattcgtggtcggcgcgggctaccgcgagctgatgactgtcgactacagc
cagatcgagatgcgcatcatggcgcacctgtcggccgacgagggccttatcgaggcgttc
aacaccggtgaggatttgcactcgttcgtggccgcccgtgccttcggcgtgcccatcgac
gaggtcaccgcggagttgcgccggcgggtcaaggcaatgtcctacggcctggcgtatggt
ctgtcggcctatggactggccacacagctcaagatctccaatgatgaggccaaagagcag
atggaccaatatttctcgcggttcggtggggtgcgcgactatctacgtgcagttgtcgat
caggcccgcaaggatggatacacctcgaccgtgctggggcgccgccggtacctgcccgat
ttggacagtggcgatcgcctccgccgcgaggccgcagaacgcgcggcgctgaacgctccg
atccaggggagcgcggccgacatcatcaaggttgcgatgatcaccacggataaggcattg
agggacaagggcttacggtcacgaatgctcctgcaggtgcacgatgagctcctcttcgag
gttgccgagggcgaacgcgagagcctggaggcattggtacgcaagaccatgggctcggcg
tatccactcgatgtgccgctcgaagtttccgtggggtacggccgcagctgggatgccgcg
gcccactga
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integrated database retrieval system
