Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_3536
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Entry
MMASJCM_3536 CDS
T03694
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mabl
Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
Pathway
mabl03420
Nucleotide excision repair
mabl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mabl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MMASJCM_3536
03430 Mismatch repair
MMASJCM_3536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mabl03400
]
MMASJCM_3536
Enzymes [BR:
mabl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMASJCM_3536
DNA repair and recombination proteins [BR:
mabl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMASJCM_3536
MMR (mismatch excision repair)
Other MMR factors
MMASJCM_3536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
ComJ
Motif
Other DBs
NCBI-ProteinID:
BAP98312
LinkDB
All DBs
Position
complement(3536111..3539356)
Genome browser
AA seq
1081 aa
AA seq
DB search
MSVVNAYSPAELSRALGLFEPTDEQSAVIGAPPGPMVVIAGAGAGKTETMAARVVWLVAN
GYATPGQVLGLTFTRKAAGQLLRRVRSRLARLAGSGILAPVAADEPDPVIATYHAYAGTL
LREHGLLLPMEPNARLLTETQLWQLAFRLVCDFDGDLDTEKTPGAVTAQVLALAGQLSEH
LVDTTDLLSSHDELERLILTLPPGPRQREGGPSAWLLRLIETQRERTQLMAIVEQLIALM
RTRGVLDFGAQMALSARLAADHPIVGQTQRERYRVVLLDEYQDTGHAQRILLSSLFGRGV
DPELALTAVGDPIQSIYGWRGASATNLPRFTTDFPLPDGSPAPTRELRTSWRNPPEALHL
ANSVSEEARRRSVAVRPLLPRPDAASGHIACALLGDIAAEREWVATQLAAVYEQAHREGN
RPPSSAVLVRRNSDAAPMAEALAAQGVPAEVVGLTGLLGLPEVADTVAMLRLVADPTAGP
AALRVLTGPRWRLGAHDLVVLWRRATGFGRGGAPAAGPDVGEEADIPCLADAISDPGTPD
EYSPEGWTRLTALRRELSALRARLGMPLTDLIAEVQRVLALDVELVAGRRGGGLDQLRAF
TDVAAGFAESADQSDPVGVVSAFLQYLDAAWEIEKGLAPVEVAASPGRVQILTVHSAKGL
EWDVVAVPHLSAGVFPSGVAAPTWLTSATELPPLVRGDRASQGDQFGVPQLDTEGITNRK
QLADAIARHKDSLATRRIDEERRLLYVAVTRCAEQLFVSGHHWGQTGLKPKGPSDFLVEL
RDVIESAAAEGVPCGTVEQWAPEPPAGERNPMLDQTVEAQWPADPLVGRRDDIEAGARLV
RAALADGAALPMENDDDTDGWEADVDALLREREQAHRRPEMTLPQHLSVTSLVELRQDPQ
ALARRLARPRPTRPDLDARRGTAFHSWVQRHYGAVRLIDFEDLPGDGYGSFEDAEDLAAL
QSAFLESEWADRTPVEVEVPFEISVAGIVVRGRIDAVFGPDSPEGTWTVVDWKTGHEPAG
DEMKAAALQLAVYRRAWASLREIDPARVRAVFHYVRSGRTVAPTELPELPHAEELAELTR
D
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagtcgtgaatgcgtactcgcccgccgagttatcgagggctttggggcttttcgaa
cccaccgatgagcagtcggccgttatcggggcacctcccggcccaatggtggtgatcgcg
ggcgccggtgcgggcaagaccgagacgatggccgcccgggtggtgtggctggtggcgaat
ggctatgccacccccggtcaggtgctcgggttgacgttcacccgcaaggctgcgggccag
ttgttgcgccgtgtcagatcgcggctggcccggctggcgggaagcgggatcctggctccc
gtcgccgccgacgagcccgatcccgtcatcgccacctatcacgcctatgccggaacgttg
ttgcgcgagcacgggctgctgctgcccatggaacccaatgcgcgtctgctgaccgaaaca
cagttatggcagctggccttccggttggtctgtgatttcgatggagacctcgacaccgag
aagacgcccggcgctgtcaccgctcaggtgctggcgctggcggggcagctttccgagcat
ctggtggacaccaccgatctgttgtcatcgcacgatgagctcgaacggctgatcctcacg
ctgcctcccggcccgcgccagcgtgagggtgggccgagcgcttggctgctgcgattgatc
gaaacacagcgtgagcgaacgcagctgatggcgatcgtggagcagctgattgcgctgatg
cgtacccgcggtgttctcgatttcggtgcacagatggcgttgtcggcgcggttagccgcc
gaccatcccatcgtcggacagactcagcgagagcgctaccgagtggtgctgttggacgaa
taccaggacacggggcatgcccaacgcatcttgttgtcgtccttgttcggtcggggcgtt
gacccggaactggcgttgaccgccgtaggtgatcccatccagtcgatctatggctggcgg
ggtgcgtcggcgaccaatctgccccgattcaccaccgactttccgctgccggatggatca
ccggcgccaaccagggaactgcgtaccagctggcgcaacccacccgaggccctacacctg
gccaactcggtctcggaggaggcgcgtcggcgttcggtggccgtccggccgctgctgccc
cggccggacgctgcctccgggcatatcgcgtgcgccctgttgggtgacatcgctgccgag
cgagaatgggtcgcaacacaactggccgcggtatatgagcaggcacatcgcgagggaaac
cgccctccgtcgtcggcggtgctggtcaggcgaaacagtgacgccgcgcccatggccgag
gctcttgccgcccaaggtgttccggccgaggtggtcggtcttaccggtctgctcggactt
ccggaggtcgccgacaccgtagccatgctccgtcttgtcgccgacccgaccgctggcccc
gccgccctgcgcgtgctgaccggaccccggtggcgtcttggcgcccacgatctggtggtg
ctgtggcggcgggcgacgggattcggccgcggcggcgcaccggcggccggcccggacgtg
ggagaggaagccgatattccgtgtctggccgatgccatcagcgatcccggtacgcccgat
gaatactcgccggagggctggacgcgcctgaccgcactgcgacgggaactgtcggcgttg
cgcgcgcgactcgggatgccgctcaccgacctgatcgccgaggtgcagcgggtgctcgcc
ttggacgtcgagcttgtcgcagggcgacgcggcgggggcctggatcagctgcgtgctttc
accgacgttgcggcgggattcgccgagtccgccgaccagagtgatccggtcggggtagtc
tccgcattcctgcaatacctggacgccgcgtgggagatcgaaaaaggcctcgcgcctgtg
gaagtggcggcaagcccgggccgggtgcagattctgaccgtgcattcggcgaaggggctg
gaatgggatgtggtggccgtcccgcatttgagcgccggggtgttcccctccggagtggcc
gcaccgacctggctgaccagcgccacggaactgcccccgctggtccgcggtgatcgcgcc
agccagggagatcaattcggggtgccccagctggacaccgagggcatcaccaatcgcaaa
cagctcgccgacgccatcgcccggcacaaggacagcctggccacgcgccggatcgatgag
gagcggcggctgttgtacgtggcggttacccgttgcgctgagcaacttttcgtctcgggg
caccattggggtcagaccgggctcaaaccgaaggggccgtcggactttctggtcgaacta
cgcgatgtcatcgagtccgctgccgccgaaggcgttccgtgcggaaccgtcgaacagtgg
gcccccgagccgccagcgggcgagcgcaatcccatgctcgaccagaccgtcgaagcacag
tggcccgctgacccgctcgtgggccgacgcgatgacattgaggccggcgcccggctggtg
cgcgcagcgctcgccgacggggcggccctgcccatggagaacgatgacgataccgacggc
tgggaggccgatgtcgacgcgctgctacgggaacgcgagcaggcccatcgccgtccggaa
atgactcttcctcagcacctttcggtgaccagtttggtggagctgcggcaggatccgcag
gccctggcccgcaggctggctcgcccgcgccccacccgtccggacctggacgctcgtcgg
ggcaccgcgttccactcctgggtgcagcgtcactacggggcggtgcggctcatcgatttc
gaagacttgcccggcgacggctacggaagtttcgaggatgccgaggacctggcggcgctg
cagtcggcgttcctggagtccgaatgggccgaccgaaccccggtagaagttgaggtgccg
ttcgagatttcggtggcggggatcgtcgtgcgtggtcgcatcgacgccgtgttcggaccc
gacagccccgagggcacgtggacggtcgtggactggaagacaggtcatgagccggcgggt
gatgagatgaaggccgccgcgctgcagctggccgtgtaccggcgcgcgtgggcgtcgtta
cgggaaatcgatcccgcgcgggtgcgtgccgtgttccattacgtgcgctcgggtcgtacg
gtggcccccacagagctgcccgagttgccgcacgcggaggagctcgcggagctgacccgg
gattga
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