KEGG   Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_3651
Entry
MMASJCM_3651      CDS       T03694                                 
Name
(GenBank) probable ATP-dependent helicase lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mabl  Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
Brite
KEGG Orthology (KO) [BR:mabl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mabl03400]
    MMASJCM_3651
Enzymes [BR:mabl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MMASJCM_3651
    5.6.2.6  RNA 3'-5' helicase
     MMASJCM_3651
DNA repair and recombination proteins [BR:mabl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MMASJCM_3651
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_4th_Lhr WHD_3rd_Lhr DEAD Helicase_C ResIII AlkZ-like PhoH AAA_25 AbiEi_4 DUF6406 AAA_22
Other DBs
NCBI-ProteinID: BAP98427
LinkDB
Position
3653924..3658477
AA seq 1517 aa
MSSEPGPLARFSAPTREWFTESFPTPTRAQSGAWQSIANGDNTLVIAPTGSGKTLAAFLW
AIDTLVQEKEAGAAAESRRLRGSRVLYVSPLKALAVDVERNLRAPLAGIARTATRMGLPE
PAITIGVRSGDTPAQRRRTLISSPPDILITTPESLYLMLTSAARETLDTVRTVIVDEVHA
VAGTKRGAHLALSLERLDERLSQPAQRIGLSATVKPAAEVARFLSGRTAATVVAPASPKT
FELSVVVPVSDMSAPESFPEPEASPDSPRGGATSLWPHVEQRIVDLIEAHRSSIVFANSR
RLAERLTARFNEIHAERLGLDLTPMPNPDVPGGPPAHIMGSGQTYGAAPLLARAHHGSVS
KEQRADIEDDLKTGRLKCVVATSSLELGIDMGAVDLVVQVEAPPSVASGLQRIGRAGHQV
GEVSRGVLFPKHRTDLLGCAVTVRRMLDGDIETLQVPANPLDILAQHTVAACALEPMDVE
KWFDVVRRSAPFTSLPRSAFDAVLDLLSGKYPSTDFAELRPRVVYDRDEGTLTGRPGAQR
LAVTSGGAIPDRGLFTVYMYAGAEGEKPSRVGELDEEMVYESRPGDVISLGATSWRITEI
THERVVVVPAFGQPGRLPFWRGDSVGRPAELGIALGQLTGELASARDAEFDKRCAAMGFD
DFATGNLRTLLTDQLRSTGAVPTDTTLIVERFRDELGDWRIVLHCPYGLRVNGPLALAIS
DRLQQRYGVSESPTATDDGIVVRLPDTDDSPPGADLFVFDAAEIESIVTREVGGSALFAA
RFRECAARALLLPRRTPGRRSPLWQQRQRAAQLLDVARKHSDFPMVLEALRECLQDVYDI
GTLVRLMSGIEQRRIRIVEVQTDTPSPFAAAQLFSYIGGFMYDEDRPLAERRAAALSLDT
NLLAELMGRVELRELLDPAVIDATERQLQHLAEERKARDAEALADLFRLLGPLTAEEIAQ
RSTGPGAAWLDELVSARRVVGTSYGQRSWWAAVEDVARLRDALGVPVPPGVPAAFTDAAT
DPLGELLSRYARTHGPFTTGEAAQRFGLGVRVAADTLSAMAARGQLVRGEFTSDATDSEQ
WCDAEVLRILRRRSLAALRAQVEPVGTSAFARFLPDWQYLDSNLRGIDGVATVIEQLAGV
PIPASAWEPLILARRIRDYSPQMLDELLASGDTVWSGHGSISAQDGWIALHPSGVAPATL
AAAETVILDDAHRAILDSLTAGGGYFFRQFGSGATRAALWDLVWAGRVTGDTFAPVRALL
GTSTTSRTAHRNRRAPRLRAYTPITTAAPVDPAVAGRWSMLPERLADGTERSHIQAELLL
GRYGVVTKGSVAAESVAGGFAWLYKVLSTFEDNGRCRRGYFVESLGGAQFASPATVDRLR
EYLDPVDDARKPYRATVLAATDPANPYGAALVWPQATSESGHRPGRKAGALAVLVDGDLA
LYIERGGKSLLSFVTDPTVLHAAALGTMELVRDGGLDGLVIERVDGRSVFDVGESAVVAA
LMEAGFARTPRGLRIRR
NT seq 4554 nt   +upstreamnt  +downstreamnt
atgagcagcgagcccggtccactcgcccggttctcggcgcccacccgggaatggttcacc
gaatcattcccgacgcccacgcgggcacagtccggcgcgtggcagtccatcgccaacggc
gataacaccctcgtcatcgcgcccaccgggtccggcaagaccctcgcggccttcctgtgg
gccatcgacaccctggtgcaggagaaggaagccggggctgcggctgaatctcgccgactt
cgcgggtccagggtcctgtacgtgtcgccactcaaggcacttgccgtcgacgtcgagcgg
aacctgcgcgccccgctggccggcattgcccgcaccgcgacacggatgggcctccccgaa
ccagcgatcaccatcggcgtgcgctccggcgacacacccgcgcagcgccgccgcacgttg
atctcctcacccccggacattctcatcaccacacccgagtcgctctacttgatgctgacc
tccgccgcacgcgagaccctggacacggtgcggaccgtcattgtcgacgaggtgcacgcg
gtggccggcaccaagcggggggcgcatctggcgctctcactggagcgactggacgaacgg
ctttctcagccggcacaacgaattggcctttcggcgacggtgaagcccgccgcagaagtc
gcgcggtttctgtccggccgcaccgccgccactgttgtcgctccggcgagccccaagacc
ttcgaactgtcggtcgtcgtgcccgtctccgatatgagtgctcccgagagttttccggag
ccggaagccagccctgattcccctcggggcggcgcgacctccctatggcctcatgtcgaa
caacgcatcgtcgatctcatcgaggcgcaccggtcgagcatcgtcttcgccaactcacgc
cgcctcgctgaacggcttaccgcccggttcaacgagattcacgctgagcgcctcggcctc
gacctcactcccatgcccaatcccgacgtaccgggagggccgccggcgcacatcatgggc
agtggccagacctacggcgcggctcccttgctggcgagggcgcatcacggctcggtaagc
aaggaacagcgcgccgacatcgaagatgatctgaagaccgggcggctcaaatgcgtggtg
gccaccagcagcctggaactcgggatcgatatgggcgccgtggatctggtggtccaggtg
gaggcgccaccgtcggtggccagtggactgcagcggatcggccgcgccgggcaccaggtg
ggcgaggtgtctcggggtgtgctgttccccaagcaccgcaccgatttgttgggctgcgcg
gtcaccgtgcgacgcatgctcgacggcgatatcgagacgctgcaggtgcccgccaacccg
ctcgacatcctggcccagcacacggtggcagcgtgtgctctcgaacccatggatgtcgag
aagtggttcgatgtggtcagacgaagcgcccccttcacctccttaccgcgcagcgcattt
gatgcggttctcgacctactcagcggtaagtacccctctaccgatttcgccgagttacga
ccgcgcgtcgtgtacgacagagacgaaggaacactcaccggacggcccggcgcacaacgg
ctggcagtcacctccggaggtgcgatacccgatcgcggtttgttcacggtgtatatgtat
gcgggcgctgagggcgagaagccttcgcgggtaggcgaactcgacgaggaaatggtctac
gaatcacggccaggagacgtgatttcgctgggcgcgaccagctggcgtatcaccgagatc
acgcatgagcgggtggtggtggtcccggcgttcggccagccgggccgactgcccttctgg
cgcggcgactcggtagggcgccccgccgagctcggcatcgcgctgggccagctcaccggt
gagctggcctccgcacgcgatgccgagtttgacaagcgctgcgccgcgatgggattcgac
gactttgcgacgggtaacctacgtacgctattgaccgatcagctgcggtcgacgggcgct
gtccccaccgataccacgctgatcgtcgagcggttccgcgacgagcttggcgactggcgc
atcgtgctgcactgcccctatgggctacgggtcaacggcccgctggcgctggcgatctcc
gaccggctccagcagcgctacggtgtcagcgagtcacccaccgccaccgacgacggcatc
gtggtgcgcctgcccgataccgacgacagcccacccggggcagatcttttcgtcttcgac
gccgcggagatcgagtcgatcgtgacacgggaggtcggcgggtcggcattgttcgccgca
cggttccgcgaatgcgcggcacgcgccctgctgctgccccgccgcacacccggacgccga
tcgccgctgtggcagcagcggcagcgggccgcccaactgctcgacgtcgcgcgtaaacat
tccgatttcccgatggtcctggaggcgttgcgcgaatgcctgcaagacgtgtacgacatc
ggcactctggtgcgattgatgtcgggtatcgagcaacggcgaatccggatcgtcgaggta
cagaccgacacgccctcacccttcgctgccgcccaattattcagctacatcggcgggttc
atgtacgacgaggatcgtccgctggccgagcgccgtgcagcggccctctcgctggacacc
aatctgctggccgaactcatgggccgcgtggaactgcgtgagctgctcgacccggcggtc
atcgacgccaccgaacgccaactgcagcacctcgccgaagagcgcaaggcccgcgacgcc
gaagccctggccgatctgttccggctactgggccccctcaccgccgaagagatcgcgcag
cgcagcaccgggcccggagccgcctggctggacgaactcgtctccgcgcggagggtggtc
gggacaagctacggacaacgcagctggtgggcggcagtggaggacgtggcacgtttacgt
gacgcgctcggggtcccggtgcctcccggtgtgccggcggcattcaccgacgcggccacc
gatccgttaggagaactgctgagtcgatacgcccggacgcatggcccgttcaccaccgga
gaggccgcgcaacgttttggcctgggggtgcgcgtggccgcggacacgctctcggcaatg
gcggcgcgtggccagctggtgcgcggtgaattcacctccgatgcgaccgattccgagcag
tggtgcgatgcggaggtgcttcgtattctgcgcaggcggtccctggccgcgctgcgcgca
caggtggagccggtgggcacctcggcgttcgcgcggttcctgcccgattggcagtacctg
gattcgaatctgcggggcatcgacggagtggccaccgtgatcgagcagctcgccggggtg
ccgattcccgcgtcggcgtgggagccgctgatcctggcacgacgcatccgtgactactca
ccccagatgctcgacgaactgctggcctcgggcgacacggtgtggtcgggacacggctcc
atctcggcacaggatggctggatcgcgctgcatccgagtggcgttgcgcccgccacgcta
gccgctgccgaaacggtgatactcgatgacgcccatcgagcgatcctggacagcctcact
gcgggcggcgggtacttcttccgccagttcggttcgggtgctacgagagcagcgctatgg
gacttggtgtgggcggggcgagtgaccggagataccttcgcaccggtgcgggcactgctg
ggcaccagcaccacatcgcgcaccgcgcaccgaaaccggcgagcaccgaggctgcgcgcc
tacaccccgatcaccaccgccgcgcccgttgatcccgcagtcgccggacgctggtcgatg
cttcccgagaggctcgccgacggtaccgaacgttcacacatacaggccgagctgctgttg
ggcagatacggcgtggtgaccaagggtagcgtcgccgccgagagcgtcgcgggcggtttc
gcctggctgtacaaggttctttcgacattcgaggacaacgggcgctgtcgccgcggctat
ttcgtcgaatcgctgggcggcgcgcagttcgcctctcccgcgaccgtcgacaggcttcgt
gagtacctcgatcccgtcgatgacgcacgcaagccgtatcgggcaacagtgctggccgcg
accgatccggccaatccctatggcgcggcactggtatggccgcaggcgacatccgaatcc
ggtcaccgtccgggcaggaaagcaggggctcttgcggtgcttgtcgacggcgacctcgcc
ctctacatcgagcgaggcggcaagtcgctgctgagcttcgtgaccgaccccacggtgctg
cacgccgcggcattgggcaccatggagttggtgcgcgacggcggactcgatggcctggtg
atcgaaagagtcgacggcagatcggtcttcgatgtcggcgagtccgcggtcgtcgcggca
ctgatggaggccggattcgcccggacgccgagaggattgaggattcgccgatga

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