| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase beta' subunit
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| KO |
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| Organism |
mabl Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:mabl00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MMASJCM_3885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mabl03021]
MMASJCM_3885
03400 DNA repair and recombination proteins [BR:mabl03400]
MMASJCM_3885
Enzymes [BR:mabl01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MMASJCM_3885
Transcription machinery [BR:mabl03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MMASJCM_3885
DNA repair and recombination proteins [BR:mabl03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MMASJCM_3885
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(3880714..3884673)
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| AA seq |
1319 aa
MLDVNFFDELRIGLASADDIRNWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITTVDEELRHNELSTLEAEMEVEKKAVADQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVRDGGEREMRQLRDRSQRELDRLDEIWTTFTKLAPKQLIVDEVL
YRELVDRYGEYFTGAMGAEAVQKLIQNFDLDAEAENLRETIRSGKGQKKLRALKRLKVVA
AFQNSTNSPGGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
AQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYFLTTEIPGDIGAHA
PAGKDQPEVGVYSSPAEAIMAMDRGALSVRAPIRVRLTQQRPPAEVEAELFENGWQPGDA
WVAETTLGRVLFNELLPHGYPFVNKQMHKKVQSAIINDLAERFPMIVVAQTVDKLKDAGF
HWATRSGVTVSMADVLVPPQKAEILDRYEKEAERIEKQYQRGALNQQERRDALVKIWQEA
TDEVGKALEEHYPADNPITLLPKSGATGNMTQVRNLAGMKGLVTNPKGEYIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCGTERGINVVI
AEKQTGPDGKATLIRDAHIETSAYARTLAADAVDADGNVLVERGHDLGDPAIEKLLAAGV
TTVKVRSVLTCTTGTGVCAMCYGRSMATGKLVDIGEAAGIVAAQSIGEPGTQLTMRTFHQ
GGVGDDITGGLPRVTELFEARVPKGKAPIADVTGRVRLEEGERFYKITIVPDDGGEEVVY
DKLSKRQRLRVFKHEDGSERPLADGDHVEVGQQLMEGAADPHEVLRVMGPRQVQVHLVNE
VQEVYRSQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERAEFESENRRVVAEG
GEPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLNGLKENVIIGKL
IPAGTGINRYRNISVQPTEEARAAAYTIPSYEDQYYSPDFGSNTGAAVPLDDYGYSDYR |
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| NT seq |
3960 nt +upstreamnt +downstreamnt
gtgctcgacgtcaacttcttcgatgaactccgtatcggcctcgcgtcggcggatgacatc
cgaaactggtccttcggcgaagtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctgttctgcgagaagatcttcggacctactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgcggcgtt
gaggtgacccgtgccaaggtgcgccgtgagcggatgggccacatcgaactggccgccccg
gtcacgcacatctggtacttcaagggcgttccgtcgcgcctcggctacctgctcgacctg
gcgccgaaggatctcgaaaagatcatctacttcgccgcctacgtcatcaccacggtcgac
gaagaactccgtcataacgagctctcgacgctcgaggccgagatggaggtcgagaagaag
gccgtcgccgatcagcgcgatgccgacctggaggcccgtgcccagaagctcgaggccgac
ctggccgagctggaggccgagggtgccaagtccgacgtgcgccgcaaggtgcgcgacggt
ggcgagcgcgagatgcgtcagcttcgcgatcggtcgcagcgtgagctggaccggctcgac
gaaatctggaccaccttcaccaagttggctcccaagcagctgatcgtcgacgaggtgctc
taccgcgagctcgtcgaccgttacggcgagtacttcaccggtgccatgggcgccgaggcc
gtgcagaagctgatccagaacttcgatctcgatgccgaggccgagaacctgcgcgagacc
atccgcagcggcaaggggcagaagaagcttcgtgcgctcaagcgcctgaaggtggtggcg
gcgttccagaactccaccaactcacccggtggcatggtgctggacgcggtgccggtgatc
ccgccggaactgcgcccgatggttcagctcgatggtggccgcttcgcgacctccgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgtctcaagcgactgatcgatctg
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtggacgca
ttgttcgacaacggccgtcgtggacgtccggtcaccgggccgggcaaccgtccgctcaag
tcgctgtccgatctgctcaagggtaagcagggccggttccgtcagaacctgctcggtaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggtccgcagctcaagctgcaccag
tgtggtctgcccaagctgatggctctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcggatggtggagcgtcagcgt
gcccaggtgtgggacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcaccaaccctgcaccgcctgggtatccaggccttcgagccgcagctggtggaaggcaag
gcaattcagctgcacccgctggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcatcttccgctgtcggcggaggcgcaggccgaggctcgcatcctcatgctg
tcctcgaacaacatcctgtcgcccgcgtcgggccgcccgctggccatgcctcgtctggac
atggtgaccggtctgtactttctgaccaccgagatccccggcgacatcggtgcacacgca
ccggccggcaaggatcagccggaggtcggcgtgtacagctcgcccgccgaggccatcatg
gcgatggaccgcggtgcgctgagtgtccgtgcacccatccgcgtgcggctgacgcagcag
cgtccgccggccgaggtcgaggccgagctgttcgaaaacggttggcagccaggcgatgcc
tgggtcgccgagaccacactgggccgcgttctgttcaacgagctgctgccccatgggtat
ccgttcgtgaacaagcagatgcacaagaaggtgcagtcggcgatcatcaacgacctcgcc
gagcggttcccgatgatcgtggtcgcgcagaccgtcgacaagctgaaggacgccggtttc
cactgggccacgcgttcgggtgtcacggtctcgatggccgacgtgctggtgccgccgcag
aaggcggagatcctggaccgctacgagaaggaagcggagcggatcgagaagcagtaccag
cgtggtgctttgaaccagcaggagcgtcgcgacgcgctggtcaagatctggcaggaagcc
accgacgaggtcggtaaggcgctggaggagcactacccggccgacaacccgatcaccttg
ctgcccaagtccggtgctaccggaaacatgactcaggtacgcaacctggcgggcatgaag
ggtctggttaccaacccgaagggtgagtacatcccgcgtccgatcaagtcctccttccgt
gaaggcctgaccgttctcgagtacttcatcaacacgcacggcgctcgtaagggcctggcg
gacaccgcgcttcgtaccgcggactcgggttacctgacccgtcgtctggtcgacgtctcg
caggacgtcatcgtccgtgagcacgactgcggcaccgaacgtggcatcaacgtggtgatt
gcggagaagcagactgggcccgatggtaaggcgacgctgatccgcgatgcgcacatcgaa
acctccgcctacgcacggactctcgccgctgacgcggtggatgccgatggcaacgtgctg
gtggagcgtggacatgacctgggcgacccggcgatcgagaagctgcttgccgcgggcgtc
acgacggtcaaggttcggtcggtgctgacctgcaccactggtaccggggtgtgtgcgatg
tgctacggccgctcgatggcgaccggcaagcttgtcgacatcggcgaggcggcgggcatc
gtggccgcgcagtcgatcggtgagcccggtactcagctgaccatgcgtaccttccaccag
ggtggcgtcggtgacgacatcaccggtggtctgccgcgtgtcaccgagctgttcgaggcg
cgtgtgcccaagggcaaggccccgattgccgatgtcaccggacgggtgcgcctggaagag
ggcgagcgcttctacaagatcaccatcgtcccggacgacggcggtgaggaagttgtctac
gacaagctctccaagcgtcagcgcctgcgcgtcttcaagcatgaggacggctccgagcgt
ccgctggccgacggtgaccacgtcgaggtcggacagcagctcatggaaggtgcggccgat
ccgcacgaggtgctccgcgtcatgggtccgcgtcaggtgcaggtgcacctggtcaacgag
gtccaggaggtgtaccgcagccagggtgtgtcgatccacgacaagcacatcgaggtcatc
gtgcgacagatgctgcgtcgcgtgacgatcatcgattcgggcgcaacggaattcctgccc
ggctcgctcaccgagcgtgccgagttcgagtcggagaaccgtcgcgtggtggccgagggc
ggcgagcccgcggccggccgtccggtgctgatgggtatcaccaaggcatcgctggccacc
gattcgtggctgtcggcggcgtccttccaggagaccactcgcgtgctgaccgatgcggcc
atcaactgccgcagcgacaagctgaatggtctgaaggagaacgtcatcatcggtaagttg
atcccggctggtaccggcatcaaccgctaccgcaacatctcggtgcagccgaccgaagag
gcgcgggccgccgcgtacacgatcccgtcctacgaggatcagtactacagccccgacttc
ggttccaacaccggtgctgcggtgccgctggacgactacggctacagcgactaccgctag |
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