Methanosarcina acetivorans: MA_0189
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Entry
MA_0189 CDS
T00080
Name
(GenBank) helicase (SNF2 family)
Organism
mac
Methanosarcina acetivorans
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AAM03642
UniProt:
Q8TU84
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Position
225245..228481
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AA seq
1078 aa
AA seq
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MIILHAGRVGKQFFLWGESPAENETPPVRRGRKPKKPVAKPYPYDSGVENLSSALELLLG
STGRKKAEEINVWIPTAGWNPIPSSPLVAEIPASKAELSLAPWTVHAYPLEAEEAIVLLC
ACMGKKVLAPGIISGNDLLWWADALKFAGSLVAGQKYLPGVRGGEGEYKAFWEPVFSGED
AGELARLAKQMPPAAKALALETSSVQPEILAAVAARQFIEEALDWIVRSEIGEKELAKEA
RKRKSFDSVHDAWVSALKSPDGLIHGEEKELLQLAFRTREWQRPLTVLTTSPFRFCFRLE
EPAAEEELEETEESEAGKMDTKKGRKGIADIEVPEELWYVRYMLQSYEDPSLLIPVKEAW
KPKKGSPLKRYDVKNIRQFLLSSLGQAAGISAGIASSLEAPNPSGYSLDTKEAYRFLTES
AADLSQAGFGLLLPGWWTRKGTKTHLKAQANVKGKKLKAGYGLTLDKIVSFDWEIALGDR
ALTVRELQALAKLKAPLVKFRGQWVEVNDAEIRAALEFWKKNPHGEASLREVLKLAVGVS
EKADGVDVEGLNAAGWIEELIRRLKDKTGFEELPAPDGFSGTLRPYQFRGYSWLAFLRQW
GIGACLADDMGLGKTIQTLALIQHDLEQVKGQVEEKVIENAEEKVEGLKAAKPVLLVCPT
SVINNWKKEAARFTPELSVMVHHGTSRKKEEEFKKEATNHSIVVSSYGLLQRDLKFLKGV
SWAGVVLDEAQNIKNPETKQAKAARALEADYRIALTGTPVENNVGDLWSIMEFLNPGFLG
NQAGFKRNFFIPIQAERDQEAARRLKEITGPFILRRLKTDTSIISDLPEKMEMKTYCTLT
KEQASLYAAVLEDIEETMEEAEEGIQRKGIILSALTRLKQVCNHPAQFLKDNSAVPGRSG
KLARLTEMLDVILENGEKALVFTQFAEMGKMLKEHLQASFGCEVLFLHGGVPRKQRDRML
ERFQEGKEYLPIFVLSLKAGGTGLNLTGANHVFHFDRWWNPAVENQATDRAFRIGQTKNV
EVHKFICAGTLEEKIDEIIERKVQVAENVVGTGEGWLTELSNEELKDILALREEAVGE
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgataattttgcatgcaggaagagtcggaaaacagttctttctgtggggcgaaagcccg
gctgaaaatgaaactccgcctgtccggcgcgggagaaagcctaagaagccggttgcaaaa
ccttatccttacgattcgggtgttgaaaacctgtcttctgctcttgagctgctgctgggc
agtactggccggaaaaaggcagaggaaatcaatgtctggatcccgacagcaggctggaat
ccaatcccctccagtcctctcgttgctgaaattccggcttcgaaagcagaactttcccta
gctccctggactgttcacgcatatcctctggaagctgaagaagctattgttctcctctgc
gcctgtatgggaaaaaaggttcttgctcccggcataatctcgggaaatgatcttctctgg
tgggcggatgccctgaaatttgcaggctcgctggtagcaggacagaaatacctgcctggc
gtcaggggcggggaaggagagtacaaggctttctgggaacccgtattttccggagaagat
gcgggggagctggcaagacttgcaaagcaaatgcctccggctgcaaaggctcttgctctt
gaaacctcttccgtgcagccggaaatacttgctgctgtagcggcaaggcagtttatcgaa
gaggctcttgactggatagtccggtccgagatcggggaaaaagagcttgcaaaagaggcg
cgtaaaagaaaatcctttgatagcgtccatgacgcctgggtttccgctcttaaaagccct
gacgggttgatccacggagaagaaaaagaactcctgcagcttgcgttccggacccgtgaa
tggcagcgcccccttactgtacttacaacttctcccttcaggttctgtttccggcttgaa
gagccagctgcggaagaagaactcgaagaaaccgaggaatccgaagccggaaaaatggat
actaaaaaaggcaggaaagggatagctgacatagaagttcccgaagaactctggtacgtc
cgctatatgcttcagtcctacgaagacccaagccttctgattcctgtaaaagaggcctgg
aaaccaaagaagggcagcccgttgaaaagatatgatgtaaaaaacattcgccaatttctg
ttatcttcccttggacaggctgctggcatcagtgcaggaattgcttccagccttgaagct
cccaacccgtccggatattcccttgatacgaaagaagcttaccgcttcctgactgaaagt
gcagcggatttaagccaggcgggcttcgggttacttctccccggctggtggacccgtaaa
ggtacaaagacccacttaaaagcccaggctaatgttaagggcaagaagttgaaggccgga
tacgggcttacactcgataaaatcgtcagctttgactgggaaattgcccttggagaccgt
gcactcacagtcagggaactgcaggctcttgcaaagctcaaagctccgcttgtgaaattc
cgcgggcagtgggtcgaggtcaacgatgcggaaatccgggctgcccttgagttctggaag
aaaaacccccacggggaagcaagtctgcgcgaagttctaaaactggctgtgggagtctcc
gaaaaagccgatggtgtagacgttgaagggcttaatgcagccggctggatcgaagaatta
atccgccgcctgaaggacaaaaccgggtttgaagaacttccggctcctgacggtttttca
ggcaccctcaggccctaccagttcagaggttactcctggctggctttcctgaggcagtgg
ggcataggagcctgccttgcagacgacatggggcttggtaaaaccatccagacccttgcc
cttatccagcacgacctggaacaggttaaagggcaggttgaagaaaaggttatagaaaat
gctgaagaaaaagttgaaggacttaaagctgcaaaaccggttcttctggtctgtccgacc
tctgtcatcaacaactggaaaaaagaggcggctcgctttaccccggaactttcggtaatg
gtccaccacgggaccagccggaaaaaggaagaggaattcaaaaaggaagccacgaatcat
tctattgtcgtctcaagctacgggcttttgcagcgggatcttaagtttttaaaaggggtt
tcctgggccggagtggtacttgacgaagcccagaatatcaaaaacccggaaaccaaacag
gcaaaggcagccagagctcttgaagccgattaccgcatagctcttacggggactccggtt
gaaaacaacgtgggagacctctggtctatcatggagtttttaaaccccggcttcctaggc
aaccaggcaggtttcaagcggaatttctttattcccattcaggccgaaagggatcaggaa
gctgcaaggaggttaaaagaaattacgggcccctttatcctgcgccgtctgaagaccgat
acttcgattatctccgacctgccggaaaagatggaaatgaaaacctattgtacgctgaca
aaagaacaggcttccctctatgccgcagtcctcgaagacatcgaagagacgatggaagag
gctgaagaaggcatccagagaaaaggtataatcctgtccgcccttaccaggctcaaacag
gtctgcaaccatccggcgcagtttttgaaggataactctgctgtacccggcaggtcagga
aaacttgcaaggcttaccgaaatgctggatgtaatcctggaaaatggggaaaaagccctt
gtgttcacccagtttgcggagatgggaaaaatgctaaaagaacacctgcaggcaagtttt
ggctgtgaagtccttttcctgcacggcggggtccccagaaagcagagggatcggatgctt
gagcgtttccaggagggaaaagaatacctccctatctttgtcctctcccttaaagctgga
ggcacggggcttaaccttacaggagcgaaccacgttttccattttgaccgctggtggaac
cctgctgttgaaaaccaggctacggacagggctttccgtataggccagacgaaaaatgta
gaggtgcataagttcatctgtgcgggtacgcttgaagaaaaaatcgatgagattatcgag
cgcaaagtgcaggttgcagagaacgttgtcggaacaggtgaaggttggctgacagaactt
tccaacgaggaattgaaggatattcttgctctccgagaagaagcggtaggtgaataa
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