Methanosarcina acetivorans: MA_0266
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Entry
MA_0266 CDS
T00080
Name
(GenBank) conserved hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mac
Methanosarcina acetivorans
Brite
KEGG Orthology (KO) [BR:
mac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mac03016
]
MA_0266
Enzymes [BR:
mac01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MA_0266
Transfer RNA biogenesis [BR:
mac03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MA_0266
Prokaryotic type
tRNA splicing ligases
MA_0266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AAM03719
UniProt:
Q8TU09
LinkDB
All DBs
Position
322988..324490
Genome browser
AA seq
500 aa
AA seq
DB search
MVESEDILSEESSAESGHRDIRGMVRKLSDNNWEIPKGHIPNMRVPGRLFVSESLLEGIE
PGTIDQIANVATLPGIQKYSMAMPDAHLGYGFAIGGVAAFDVEEGIISPGGVGFDINCGV
RLIRTNLQKEDVVPEIKKLTDELFTNVPAGVGSKSRFRASDRELDSAFLEGAKWAVDAGY
GVDADVEHCEGNGYLEGADTSYVSTKARNRGKPQLGTLGSGNHFLEVQYVDEIYDREVAS
AFGLEEGQVTVMVHCGSRGAGHQICTDHLKELSQAVKKYGIEIPDKQLACAPAQSREAQN
YFKAMLCAANYAWANRQMITHWTRESFEKVFGRDADEMGMSLLYDVAHNVAKLEEHNIEG
RKKEVYVHRKGATRAFPAGHPEVPAAYRDVGQPVLIPGSMGTPSFILCGAKDAMDVSFGS
ACHGAGRVMSRAHAKKEFRGQSVKENLEAHGITVRATHPSVIAEEAPGVYKSSSEVVNVV
HELGIARKVARVIPLGVAKG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtagagagtgaagacatcttaagcgaggaatctagcgcggaaagtggacaccgggat
ataagaggtatggtccggaagctttccgataataactgggaaatcccgaaaggtcatatc
cccaatatgagggttccgggacgcctgtttgtatccgaaagtttgcttgaaggcatcgag
cccggcactatagaccagattgcaaacgttgcaactcttcctggcattcagaaatattcc
atggcaatgcctgatgcccacctcggctatggttttgctatagggggtgttgcagctttt
gatgtcgaagagggaattatcagtcccggtggagtgggttttgatatcaactgcggggtt
cggctaatccgcacaaacctccagaaggaagatgtggttcctgaaatcaaaaagctgacc
gatgagctgtttactaatgtgcctgccggggtcgggtcaaaaagccggttcagggcttct
gatcgggaactggacagtgcgtttcttgagggggcaaagtgggcagtagatgccggatat
ggtgtggatgcggacgtggagcattgtgaggggaatggctaccttgaaggggcagatact
tcttatgtaagcacaaaggcaaggaaccgcgggaaacctcagttaggaactctcggtagt
ggcaaccatttccttgaagtccagtatgtggacgagatttatgaccgggaagtagcttcg
gctttcgggcttgaagagggccaggttacggtaatggttcactgcgggtcaaggggtgca
gggcatcagatctgcactgaccacctgaaagaactctctcaggctgtgaagaaatacggg
attgaaattccggacaagcaacttgcctgtgctccggctcagtcaagggaagcccaaaac
tatttcaaagccatgctctgcgctgcaaattatgcctgggcgaacaggcaaatgatcact
cactggacacgtgagtcttttgaaaaggtatttggcagggatgccgatgaaatgggaatg
agccttctgtacgacgttgcccacaacgtggcaaaactggaagaacataacattgaaggc
aggaaaaaagaggtttacgtgcacagaaaaggggcaacaagagcatttcctgccgggcac
ccggaagttccggccgcatacagggacgtgggacagccggttttaattcccggaagcatg
ggtacgccttctttcatactctgcggggcaaaagatgctatggacgtttcttttggcagt
gcctgccacggggccggaagggttatgagcagggcccatgcaaagaaagagttccgcgga
caaagtgtaaaagagaaccttgaagcccatggaatcactgttagggcaactcacccctcc
gtaattgccgaagaagctcccggggtttataagtccagcagtgaggtggtaaatgtcgtg
cacgagcttggtattgcccgcaaggttgcaagagtcatccctcttggggtcgcaaagggt
taa
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