Methanosarcina acetivorans: MA_0278
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Entry
MA_0278 CDS
T00080
Symbol
tbp-3
Name
(GenBank) TATA-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mac
Methanosarcina acetivorans
Pathway
mac03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MA_0278 (tbp-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mac03000
]
MA_0278 (tbp-3)
03021 Transcription machinery [BR:
mac03021
]
MA_0278 (tbp-3)
Transcription factors [BR:
mac03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MA_0278 (tbp-3)
Transcription machinery [BR:
mac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MA_0278 (tbp-3)
RNA polymerase III system
TFIIIB
MA_0278 (tbp-3)
RNA polymerase I system
SL1/TIF-1B
MA_0278 (tbp-3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
AAM03731
UniProt:
Q8TTZ7
LinkDB
All DBs
Position
333941..334498
Genome browser
AA seq
185 aa
AA seq
DB search
MESTITIENVVASTALATEFDLVKIMDSGLEGAEYNKTKFPGLVYRIDNPKAAFLIFTSG
KVVCTGAKTINNAHKAITNLANKLKDIGCDKINLEPEIHVQNIVASADLKTTLNLNTIAI
AFGLENVEYEPEVFPGLIYRVEAPKVVVLVFSSGKLVITGGKCEEDCNGGLRIVRKEFDN
LGLLC
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggaatccacaataactatagagaacgtggtggcatctaccgcgttggcgacagaattc
gacttggtaaaaataatggattctgggctggaaggtgcagagtataacaaaacgaagttc
ccaggcctcgtatacagaattgataaccccaaagctgcctttctaattttcacctccgga
aaagtggtatgcactggagctaaaactatcaataatgcccataaagccataaccaatctg
gctaacaaactaaaggacatcggctgcgataaaataaatctcgaacctgagatacatgtt
cagaacattgtagccagtgctgatttgaaaacaacccttaacctgaacaccattgctata
gcttttggtctggagaatgtcgaatatgagccagaggtgtttcctgggcttatttataga
gtcgaggctcccaaggtagtagtgcttgtgttcagctctggcaagctggttatcacaggt
ggaaaatgtgaggaagattgtaatgggggtctacggatcgtcagaaaagagttcgacaac
ttaggacttctctgttaa
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