Methanosarcina acetivorans: MA_0823
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Entry
MA_0823 CDS
T00080
Symbol
recJ
Name
(GenBank) ss-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mac
Methanosarcina acetivorans
Pathway
mac03410
Base excision repair
mac03430
Mismatch repair
mac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MA_0823 (recJ)
03430 Mismatch repair
MA_0823 (recJ)
03440 Homologous recombination
MA_0823 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mac03400
]
MA_0823 (recJ)
DNA repair and recombination proteins [BR:
mac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MA_0823 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MA_0823 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MA_0823 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
SelA
Motif
Other DBs
NCBI-ProteinID:
AAM04262
UniProt:
Q8TSH3
LinkDB
All DBs
Position
complement(957309..958739)
Genome browser
AA seq
476 aa
AA seq
DB search
MRQQRISERVMTETMEAFRKEADRCAEEIRKHRSVHIVSHIDADGLTSAGIICTALERGN
FEYTTRFVKQLDEKALDTIADENHEFVVFTDLGSGMCEQIKARGISAVVSDHHQPQGTLD
LHLNPHLFGANGSYELSGSGTTYLLASALGKNRDLSSLAIVGAVGDMQHLKMGQLVGINR
LILEEGVQGGHLEFKKDLTLFGKQTRPIYKLLQYSSDPYLPGLTGNEEACIEFLHALNIR
YSQDERWRRWIDLEVSEKQKIVSGLFQYCLKSGIPSYRIERLIGEVYVLLNEREGTEMRD
ASEFSTLLNATARYDHADIGLAVCMGDRENAYEDAKKLLAEHRQNLVNGLMYVKENGVTQ
LENMQYFDAGSQIKETIVGIIAGMSSTIVENRNLPIIAFANTEGGIKVSARGTQDLIRRG
VNLSEAMSTVSAEVGGAGGGHDIAAGATIPVNMKEEFARKLDHFIGEQLRRKTGTG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagcagagaatctcggagagagtaatgactgaaactatggaagcatttagaaaa
gaagcggacaggtgtgccgaagagataagaaaacacaggtcagtgcatatagtatctcat
attgatgcggacgggctgacttcagcagggattatctgcacagctcttgaacggggaaat
ttcgaatatacaacgcgttttgtaaagcagctcgatgaaaaagcccttgacactattgca
gatgaaaaccacgaatttgtagtttttacggacctcggaagcgggatgtgcgaacagata
aaagcccgcgggatcagtgctgttgtttcagaccaccatcagcctcagggcactctggat
ctccaccttaacccacacctcttcggggcaaacgggtcttacgaactgagcggctcgggg
accacctaccttctggcttcagccctcggaaagaacagagacctttcctcacttgccata
gtaggggctgtaggggatatgcagcacctgaaaatggggcagcttgtagggattaacagg
ctaattctggaggaaggggtgcaaggggggcaccttgagttcaaaaaagacctgaccctg
ttcggaaagcagacccgcccaatctacaaacttttgcagtactcttctgatccttacctt
cccggacttaccggaaacgaagaagcctgtatagaatttcttcatgccctgaatatccgc
tacagccaggacgagcgctggagacgctggatagacctggaggtttcggaaaagcagaaa
attgtctcagggctcttccagtattgcctcaaatcagggatcccgtcatacaggatcgag
cgcctgataggtgaggtgtatgtccttctcaatgagagggaaggaacggaaatgagagat
gcctcagagttttccacactcctcaatgctactgcccggtacgaccatgctgacatcggg
cttgcagtctgcatgggagacagagaaaacgcctacgaagacgccaagaaactgcttgcc
gaacacaggcagaacctcgttaacgggcttatgtacgttaaagaaaatggagttacacag
ctcgagaacatgcagtacttcgatgcgggctcgcagataaaagaaactattgtaggaata
attgcaggcatgagctccacaatagtcgaaaaccgaaatcttccgattatcgcttttgca
aacacagagggagggataaaggtctcggcaagagggacgcaggacctgattcgcagagga
gtaaacctgtctgaagcaatgtcaacggtctcggccgaagtagggggagcaggcggcgga
catgatatcgccgcaggggcaactatacctgtaaacatgaaggaagagtttgcccgaaaa
cttgaccatttcataggagaacagcttcgacggaaaacaggtacaggatga
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integrated database retrieval system
