Methanosarcina acetivorans: MA_2510
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Entry
MA_2510 CDS
T00080
Symbol
topA
Name
(GenBank) DNA topoisomerase, type I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mac
Methanosarcina acetivorans
Brite
KEGG Orthology (KO) [BR:
mac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mac03032
]
MA_2510 (topA)
03400 DNA repair and recombination proteins [BR:
mac03400
]
MA_2510 (topA)
Enzymes [BR:
mac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MA_2510 (topA)
DNA replication proteins [BR:
mac03032
]
Prokaryotic type
DNA Topoisomerases
MA_2510 (topA)
DNA repair and recombination proteins [BR:
mac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MA_2510 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
Cdd1
DUF4332
DNA_pol_lambd_f
IMS_HHH_1
RAD51D_N
DUF2283
Motif
Other DBs
NCBI-ProteinID:
AAM05896
UniProt:
Q8TMY4
LinkDB
All DBs
Position
3114624..3116882
Genome browser
AA seq
752 aa
AA seq
DB search
MHLIVTEKNIAARRIAAILAPKSPKKERVSGVDVYRYELGKGKSRQETAVVGLSGHIVGI
DFQKEYNNWQKVDARALIDAEITTTPINRKIVTALRTLGKEADRVTIATDYDREGELIGV
EALNIIKKVNPEVPFDRVRYSAITPKAIDAAFTNPTSVDFDLADAGHSRQVIDLVWGAAL
TRYISLAAGRLGKMFLSVGRVQSPTLSLVVDREKERNIFVPTPYWEIHVELETKAGETFS
AQHSTRRFLDKEEATAVFKKLGKKAELKEIEKGTKSDLPPTPFNTTGFISAANSIGLSPA
NAMRIAESLYTNGYISYPRTDNTVYPETLDLRAQIEIFTEGPFKEFADALLEKAELVPTR
GKKETTDHPPIYPASLAKESELKEEEWKVYELVVRRFFATFAGPSTWETMRLRLEINAEE
FRANGARLLEPGWRWYYPYNVPEDRLFPELSEGEILKVIKKEMLDKETQPPGRYGQGRLI
NIMEELGLGTKATRHEIISKLYSRAYIHGNPVQPTNTSFAVVETLEKYSPTITKPDMTKL
LEENMDLIAEGKIKEDTVLEESREMLQQVFSELDKNRDKIIESLQAGLREDKIIGNCSLC
GNELMIRRSKRGSRFIGCSNYPNCTFSLPLPKSGQIVVTDKQCETHGLHHIRIINAGKRP
WDLGCPQCNFIEWQKTQKEKQAQQPKKEKPKTIKDIEGVGKATAGKLEEAGITSVEALAE
ADPIELAKTIKTSVKKVKTWQISCNGGIVEDL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttatcgtaacggaaaaaaatatagcagcaaggaggatagctgcgattctggct
ccaaaaagtcctaagaaggaaagagtcagcggagtagacgtataccggtacgagcttgga
aaaggcaaaagcaggcaggagactgcagtagtagggctttccgggcatattgtcgggata
gattttcaaaaagagtacaacaactggcagaaggttgatgccagagccctgatcgacgct
gagattacgacgactccaatcaaccggaagatagtgaccgctttaaggacccttggaaaa
gaagcagatagggtcacaattgcaactgactacgaccgggaaggggaactgataggagtc
gaagctctgaatatcataaagaaggtgaacccggaggtaccttttgacagggtccgctac
agtgcaatcaccccaaaagcaattgatgcagcatttacaaaccctacaagtgttgatttt
gaccttgccgatgcaggccactccaggcaggttattgacctggtctggggagctgccctt
acccgatatatttcccttgcagcaggcaggctcgggaaaatgttcctatccgttggaagg
gtgcaatccccaaccttatcacttgtagtcgacagggaaaaagagagaaatatttttgtt
cctactccttactgggaaatccacgtcgaacttgaaacaaaagcaggtgagactttttca
gcccagcactcaacccgccgtttcctggacaaagaggaagctacagcggtctttaagaaa
ctgggaaaaaaagccgaattaaaagagatagaaaagggcacaaaaagtgacctgcccccg
accccatttaatactacaggctttatcagcgcggcaaactcaatcgggctcagccctgca
aacgccatgcgtatagccgaatccctctacactaacgggtatatatcttatcccaggacc
gacaatacggtttatcccgaaacccttgacctcagggctcaaattgaaatctttacggaa
gggccttttaaggagttcgcagacgccctgcttgagaaagccgaacttgttcccacccgc
gggaaaaaagaaacaacagaccacccccctatctatccggcgtcccttgcaaaggaatcc
gagttaaaagaagaggaatggaaggtctacgagcttgtggtcaggcgcttttttgcaacc
ttcgcaggacccagcacctgggagaccatgcgcctgagactcgaaatcaatgccgaagag
ttcagggcaaacggagcaagattgctggaaccgggatggcgctggtattacccttacaat
gtccctgaagacaggctgtttccggaactcagcgaaggagaaatccttaaagtcataaaa
aaagagatgctggacaaagaaacccagccacccggccgttacgggcagggcaggctgatc
aacataatggaagagctgggtcttggcacaaaagctacccgccatgagattatcagcaag
ctctattccagggcatatatccacggaaacccggtacagcccacaaatacctcttttgcc
gtggtggaaactcttgaaaaatactcgcctacgatcacaaaaccggacatgacaaagctg
cttgaagaaaatatggacctgatcgcagaaggcaaaattaaagaggacactgtccttgaa
gagtccagagaaatgctccagcaggtattttcggaactcgacaaaaacagggacaaaatc
atagagtccctgcaggcaggtctcagggaagacaagatcataggcaactgctccttatgc
ggaaacgaactcatgatccgccgctcgaaaagaggaagccgctttataggctgcagcaat
taccctaactgtaccttctccctccccctaccaaagagcggccagatcgtggttacagac
aagcaatgcgagacacacggcctgcaccacatccgcataattaatgccggaaaacgcccc
tgggacctcggctgcccccagtgcaactttatcgaatggcaaaaaacccagaaagaaaag
caggcccagcagccgaaaaaagaaaagcccaagacaattaaagacatcgaaggcgtggga
aaagccactgcaggaaaactggaagaagcagggatcacaagcgtggaagccctggcagaa
gccgatcccatagaactcgcaaaaacaataaagaccagcgtaaaaaaggtcaaaacctgg
cagatctcatgtaacggcggcatagttgaggacctataa
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