Methanosarcina acetivorans: MA_2525
Help
Entry
MA_2525 CDS
T00080
Name
(GenBank) WD40-repeat containing protein
Organism
mac
Methanosarcina acetivorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
nSTAND1
PD40
RMC1_N
Ge1_WD40
Coatomer_WDAD
Nup160
PQQ_2
Bflower_3
NBCH_WD40
Cytochrom_D1
PROPPIN
AAA_16
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AAM05908
UniProt:
Q8TMX4
LinkDB
All DBs
Position
3136231..3139932
Genome browser
AA seq
1233 aa
AA seq
DB search
MEEPEFQAYVGPRPFEQEDKFIFFGRDREARDLLSLVIAHNLVLVYAQSGAGKTSLINAG
LIPLLKENRFEVFPVARVKGTPLRNIKTDEISNIYVLNTLTSWAEDEYDVERLTKMKLVD
FLNEQERLQDEDGIPLPRAVIFDQFEEIFSLYQDRWKDREGFFEQISAALETDPLLRVVF
VIREDFIAQLDPYVELLPERLRTRFHIERLRREAALLAIKEPLRDTGRSFAEGVAEKLVD
DLLKIRVETTPGETTEVTGEFIEAVQLQVVCQNLWRELPPDVKQITFHHLKTYGNVEQEL
YRFYEEAIRTAAATAHIDEESLRRLFGEVLITTMGTRGMVYRAQESTGGIPNTAIDVLES
MHLIRAEWRAGARWYELTHDGFIKPILSSNRVFNDELAEKERAEKERIEKERIEKEWAEK
EWAEKERLEKERAEKERLEKELRAEKELAESKQLFYKRLAAISFLAILLALVAVFEWHQA
KENAEEARASDLNLNSALLQGDPRNLDKSVLLAIESLKIHITSTADHLIRQGLLSMPHRV
VILKHYSDVNNVVFSPDGKYVATASNDNTSRLWDVSTGKQIFVLNHTDPVRNVVFSPDGK
YVATASADKTAGVWNTTTGEGISVLNHTGRVNNVVFSPDGKYIATASDDNTSRLWDTATG
KQIFVLNQTDPVRNVVFSPDGKYIATASADNTSRLWDTTTGKQIFDMKHDGPVNIVVFSP
DGKYVATASADKKARLWNATTGKKIFDMKHDSGINTVVFSPDGKYIVTASDDKTAGVWNT
TTGKKIFDMKHDGSVNTVVFSPDGKYIATASADNTSRLWDTATGEKIFFLNHYGWVNTVV
FSPDGKYVATASADKTAHLWDVSTGKQISYLRHDSGVNNVVFGPDGKYVVTASADKTADV
WNTTTGEKIFVLNHTGRVNNAVFSPDGKYIATASADNTSRLWDTTTGKQIFVLNQTDPVR
NVVFSPDRKYIATASDDNTSRLWDTATGKQILVLNHDGPVNTVVFSSDGKYIATASDDNT
SRLWDTATGEEIFVLNHTDRVNNVVFSPDGKYIATAGDDNTSRLWGTATGEKIFDMKHDG
PVNNVVFSPDGKYVATAGYDNTACLWDTATGEKIFVLNHAGRVNTVVFSPDGKYIATASA
DKARLWNATTGKQISYLRHDSGVNNVVFSPDGKYIATASVDKTARLWTAKLWISDTEDLI
DEANNRLTRNLKPEEWKEYMGDKPYHKRFPNLP
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacctgaattccaggcttacgtgggccctcggccttttgaacaggaagataaa
ttcatttttttcggaagagaccgtgaagctcgtgatctcctgtccttagtcattgcacat
aatctggttctcgtctatgcccagtcgggtgcaggtaagacttcacttatcaatgccggg
cttattcctctcctgaaggaaaaccggtttgaagttttcccggtggcgcgagttaaaggc
acacctttaagaaatataaaaactgacgagatttcgaacatatatgttcttaatacgctc
acaagctgggctgaagatgaatacgacgttgaacgcctgaccaaaatgaaactcgttgat
tttttgaatgaacaggagcgcctgcaggatgaagatggcatacctttaccccgtgccgtt
atcttcgaccagtttgaggaaatattctctttatatcaggaccgctggaaagatagagag
ggattttttgagcaaataagcgctgctctggaaacagacccccttttgagggttgttttt
gtcatacgggaggatttcatagctcaactagacccttatgtagagcttcttcccgagaga
ttgcggacgcgttttcacatagagcgcctgcgacgtgaggctgcactgctggcaatcaaa
gagccgttaagagataccggtcgttcttttgcagaaggtgtggcagaaaaacttgtcgat
gatttgctgaagattcgagttgaaacgacaccaggcgagaccactgaggtaacaggagag
ttcatagaggctgtgcaacttcaggtagtgtgccagaacctctggagagagttaccgcca
gatgtcaagcaaatcacgtttcatcacctgaaaacctatggcaatgtagaacaggaactt
tacagattttacgaagaagctataaggacagcggcagctacggcacatattgacgaggag
agcctgcgcagattgttcggtgaagtgctgataacgacgatggggacgcgggggatggta
taccgggctcaagagtccactggcggcattcccaatacagccattgatgtgcttgaaagc
atgcaccttattagagcagagtggcgggcaggtgcgcgctggtatgaactgacccacgac
ggttttatcaagccgatactatcttctaacagggtttttaatgatgaactggcagagaaa
gaaagggcagagaaagaacggatagagaaagaacggatagagaaagagtgggcggagaaa
gaatgggcagagaaagaaaggctagagaaagaaagggcagagaaagaaaggctagagaaa
gaactacgggcagagaaagaactggcagagagcaaacaacttttctataaaagacttgca
gccatttcttttcttgctatacttctagctttagttgcagtctttgaatggcatcaagcc
aaggaaaacgcggaagaagctcgtgcttcggatttaaatttaaattccgcccttcttcag
ggagatcccaggaatctagataaaagtgttctccttgctatcgaatcattgaaaattcat
ataacatcgactgccgatcatttaatacgtcagggattattatccatgcctcaccgtgtt
gtgattctgaaacattatagtgatgtgaataatgttgtgttcagtcctgatggaaaatat
gttgctacggcgagcaatgataatacatcacgtttatgggatgtatctacaggtaaacaa
atctttgtcctgaaccatactgatccagtgcgtaatgttgtgttcagtcctgatggaaaa
tatgttgctacggcgagcgctgacaaaacagcaggcgtatggaatacaactacaggtgaa
ggaatttctgttctgaaccatactggtagggtaaataatgttgtattcagtcctgatgga
aaatatattgctacggcaagtgatgacaatacatcacgtttatgggatacagctacaggt
aaacaaatctttgttctgaatcagactgatccggtgcgtaatgttgtattcagtcctgat
ggaaaatatatcgcaacggcgagcgctgacaatacatcacgtttatgggatacaactaca
ggtaaacaaatctttgatatgaaacatgatggtccggtaaatattgttgtattcagtcct
gatggaaaatatgttgctacggcgagtgctgacaaaaaagcgcgtttatggaatgcaact
acaggtaaaaaaatttttgatatgaaacatgatagtggtataaatactgttgtattcagt
cctgatggaaaatacatagtaacggcgagtgatgacaaaacagcaggagtttggaataca
actacaggtaaaaaaatctttgatatgaaacatgatggttcggtaaatactgttgtattc
agtcctgatggaaaatacatcgcaacggcaagcgctgacaatacatcacgtttatgggat
acagctacaggtgaaaaaattttttttctgaaccattatggttgggtaaatactgttgta
ttcagtcctgatggaaaatatgttgctacggcgagcgctgacaaaacagcacatttatgg
gatgtatctacaggtaaacaaatttcttatctgagacatgatagtggtgtgaacaatgtt
gtgttcggtcctgatggaaaatatgttgttacggcgagcgctgacaaaacagcagacgtg
tggaatacaactacaggtgaaaaaatttttgttctgaaccacactggcagggtaaataat
gctgtattcagtcctgatggaaaatatatcgcaacggcgagcgctgacaatacatcacgt
ttatgggatacaactacaggtaaacaaatctttgttctgaatcagactgatccggtgcgt
aatgttgtattcagtcctgatagaaaatatattgctacggcgagtgatgacaatacatca
cgtttatgggatacagctacaggtaaacaaatccttgttctgaaccatgatggtccggta
aatactgttgtattcagttctgatggaaaatatattgctacggcgagtgatgacaataca
tcacgtttatgggatacagctacaggtgaagaaatttttgttctgaaccatactgatagg
gtaaataatgttgtgttcagtcctgatggaaaatatattgctacggcaggtgatgacaat
acatcacgtttgtggggtacagctacaggtgaaaaaatctttgatatgaaacatgatggt
ccggtaaataatgttgtgttcagtcctgatggaaaatatgttgctacggcgggctacgat
aatacagcatgtctatgggacacagctacaggtgaaaaaatttttgttctgaaccatgct
ggtagggtaaatactgttgtattcagtcctgatggaaaatatattgctacggcaagcgct
gacaaagcgcgtttatggaatgcaactacaggtaaacaaatttcctatctgagacatgat
agtggtgtgaataatgttgtgttcagtcctgatggaaaatacatcgcaacggcgagtgtc
gacaaaacagcaaggttgtggacagcaaagttgtggatatctgatacagaagatcttata
gatgaagccaacaatcgtctaacccggaatcttaaaccagaggaatggaaagaatatatg
ggcgataagccgtatcacaagagatttccaaatttaccataa
DBGET
integrated database retrieval system
